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IL32
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:558.9 nTPM
HPA:558.9 nTPM
GTEx:336.1 nTPM
FANTOM5:1095.7 Scaled Tags Per Million

SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029397Antibody CAB030029
Glandular cells HighMedium





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 558.9
overview
Male, age 65
Small intestine sample 232
nTPM: 385.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 784.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 351.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 714.3

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 336.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 336.1
Samples: 187

Max nTPM: 2595.5
Min nTPM: 19.8
Std nTPM: 336.2
Median nTPM: 219.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 2595.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1444.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1373.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1273.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1178.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1098.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1092.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1092.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1012.4
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 939.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 928.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 911.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 904.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 890.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 859.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 835.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 812.6
GTEX-ZTSS-0926-SM-59865 40-49 years, male 797.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 735.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 733.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 730.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 671.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 670.9
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 668.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 665.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 663.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 649.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 629.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 629.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 625.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 609.4
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 608.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 598.4
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 595.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 581.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 529.9
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 519.4
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 514.9
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 514.1
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 500.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 488.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 471.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 469.1
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 468.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 464.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 464.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 463.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 460.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 454.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 453.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 437.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 433.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 428.3
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 425.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 418.2
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 401.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 399.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 397.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 389.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 388.7
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 388.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 387.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 383.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 374.4
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 352.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 352.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 346.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 342.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 337.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 334.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 330.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 329.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 323.8
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 319.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 313.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 310.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 305.4
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 301.1
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 294.8
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 294.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 289.2
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 286.4
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 266.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 258.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 242.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 242.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 238.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 234.1
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 229.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 225.4
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 225.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 225.1
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 224.2
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 219.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 210.8
GTEX-1C475-1426-SM-793CH 40-49 years, female 210.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 209.9
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 206.8
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 206.3
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 206.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 201.2
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 200.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 198.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 197.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 195.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 194.3
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 191.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 187.8
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 187.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 187.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 186.9
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 183.4
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 170.1
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 169.9
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 169.5
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 165.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 161.6
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 159.7
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 158.6
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 156.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 156.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 150.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 145.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 144.9
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 144.1
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 143.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 143.1
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 140.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 133.4
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 132.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 131.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 127.1
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 122.7
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 122.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 119.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 113.5
GTEX-183FY-1626-SM-793D8 20-29 years, male 111.8
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 111.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 109.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 106.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 105.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 103.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 103.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 97.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 97.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 97.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 91.0
GTEX-1192X-2526-SM-59868 50-59 years, male 85.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 82.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 81.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 81.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 80.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 78.8
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 74.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 72.9
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 71.5
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 70.4
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 68.2
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 67.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 67.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 66.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 61.4
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 60.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 59.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 57.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 57.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 54.1
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 52.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 50.2
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 49.4
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 46.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 44.4
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 43.8
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 39.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 38.4
GTEX-117YX-0326-SM-5GICL 50-59 years, male 35.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 35.0
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 34.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 28.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 27.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 27.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 26.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 23.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 23.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 20.4
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 19.9
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 19.8
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1095.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 1095.7
FF:10024-101D6 15,40,85 years, mixed 1095.7

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