HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.2 nTPM
HPA:24.2 nTPM
GTEx:24.9 nTPM
FANTOM5:42.0 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:58.8 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.2
Sample id Sample description nTPM
Hippocampus
nTPM: 21.5
1855 Male, age 76, left hemisphere 24.7
2621 Female, age 67, right hemisphere 22.3
2148 Female, age 91, left hemisphere 22.2
1898 Male, age 80, left hemisphere 21.0
2529 Female, age 94, left hemisphere 20.0
1911 Female, age 85, right hemisphere 18.8
Dentate gyrus
nTPM: 20.7
1927 Female, age 91, both hemispheres 23.1
2010 Male, age 76, both hemispheres 22.3
2528 Male, age 74, both hemispheres 21.6
2246 Female, age 85, both hemispheres 20.8
2531 Female, age 67, both hemispheres 20.2
2530 Female, age 94, left hemisphere 16.5
Entorhinal gyrus
nTPM: 23.9
2613 Female, age 94, left hemisphere 28.8
2764 Male, age 80, right hemisphere 25.4
1787 Male, age 76, left hemisphere 24.4
2686 Male, age 75, right hemisphere 22.9
1938 Female, age 85, left hemisphere 22.8
2117 Female, age 91, right hemisphere 18.9
Hippocampus, CA1
nTPM: 21.8
2749 Male, age 80, left hemisphere 25.6
2045 Male, age 76, both hemispheres 21.7
2527 Male, age 74, both hemispheres 21.1
1873 Female, age 85, both hemispheres 20.7
2082 Female, age 91, right hemisphere 20.0
Hippocampus, CA2
nTPM: 21.4
1963 Male, age 80, left hemisphere 26.0
1892 Male, age 76, both hemispheres 23.6
1940 Female, age 85, left hemisphere 20.2
2113 Female, age 91, right hemisphere 19.8
2437 Female, age 94, left hemisphere 19.7
2249 Male, age 74, both hemispheres 19.2
Hippocampus, CA3
nTPM: 21.4
2861 Female, age 67, both hemispheres 24.2
2137 Male, age 80, left hemisphere 23.4
2620 Female, age 94, left hemisphere 20.9
2436 Male, age 74, both hemispheres 20.7
1867 Male, age 76, both hemispheres 20.5
1891 Female, age 85, both hemispheres 18.9
Parahippocampal cortex
nTPM: 22.0
2622 Female, age 67, right hemisphere 23.3
2532 Female, age 72, left hemisphere 23.1
1933 Female, age 85, both hemispheres 23.0
1850 Male, age 80, both hemispheres 22.5
2245 Female, age 91, both hemispheres 22.2
2250 Female, age 67, right hemisphere 21.9
2693 Female, age 94, both hemispheres 21.9
2018 Male, age 76, both hemispheres 21.7
2692 Male, age 74, both hemispheres 20.3
1990 Female, age 91, right hemisphere 20.0
Perirhinal gyrus
nTPM: 24.2
1847 Female, age 91, left hemisphere 25.7
1794 Male, age 80, right hemisphere 24.9
2848 Male, age 76, right hemisphere 24.4
2521 Female, age 94, right hemisphere 23.9
1841 Female, age 85, right hemisphere 22.2
Subiculum
nTPM: 19.9
2619 Male, age 74, both hemispheres 20.8
1977 Female, age 85, both hemispheres 20.5
2438 Female, age 94, left hemisphere 20.3
2729 Female, age 91, right hemisphere 20.0
1901 Male, age 80, both hemispheres 19.0
2042 Male, age 76, both hemispheres 18.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 45.4
Min nTPM: 11.0
Std nTPM: 5.9
Median nTPM: 24.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 45.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 42.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 38.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 38.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 38.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 37.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 37.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 35.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.0
FF:10153-102I9 76 years, female 54.7
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 19.3
Min nTPM: 14.6
Sample A Female 19.3
Sample B Female 15.7
Sample C Male 17.2
Sample D Male 14.6
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.7
Sample A Female 18.5
Sample B Female 13.7
Sample C Male 17.4
Sample D Male 16.8
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 19.3
Min nTPM: 14.7
Sample A Female 19.3
Sample B Female 14.7
Sample C Male 17.9
Sample D Male 15.3
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 22.1
Min nTPM: 12.2
Sample A Female 17.3
Sample B Female 12.2
Sample C Male 22.1
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.0
Samples: 4

Max nTPM: 52.4
Min nTPM: 44.5
Sample A Male 44.5
Sample B Male 52.4
Sample C Female 48.0
Sample D Female 51.0
Hippocampal formation
nTPM: 58.8
Samples: 4

Max nTPM: 64.9
Min nTPM: 55.1
Sample A Male 56.9
Sample B Male 64.9
Sample C Female 58.1
Sample D Female 55.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
2675 Antisense, RP_040526_02_B06, Mouse strain C57BL/6J (56 days, male) 3.4
2676 Antisense, RP_040526_02_B06, Mouse strain C57BL/6J (56 days, male) 2.0

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