HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:137.6 nTPM
HPA:137.6 nTPM
GTEx:126.8 nTPM
FANTOM5:409.1 Scaled Tags Per Million
Pig:141.1 nTPM
Mouse:104.0 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018846Antibody HPA052221
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 137.6
Sample id Sample description nTPM
Hippocampus
nTPM: 134.2
1898 Male, age 80, left hemisphere 152.3
2529 Female, age 94, left hemisphere 137.3
1911 Female, age 85, right hemisphere 131.4
2621 Female, age 67, right hemisphere 130.9
1855 Male, age 76, left hemisphere 130.4
2148 Female, age 91, left hemisphere 122.8
Dentate gyrus
nTPM: 132.8
2530 Female, age 94, left hemisphere 146.3
2010 Male, age 76, both hemispheres 144.0
1927 Female, age 91, both hemispheres 132.6
2246 Female, age 85, both hemispheres 127.6
2528 Male, age 74, both hemispheres 127.3
2531 Female, age 67, both hemispheres 119.1
Entorhinal gyrus
nTPM: 132.3
2686 Male, age 75, right hemisphere 140.7
2117 Female, age 91, right hemisphere 137.2
1938 Female, age 85, left hemisphere 136.9
1787 Male, age 76, left hemisphere 130.7
2764 Male, age 80, right hemisphere 127.9
2613 Female, age 94, left hemisphere 120.2
Hippocampus, CA1
nTPM: 136.5
2749 Male, age 80, left hemisphere 160.9
1873 Female, age 85, both hemispheres 142.1
2527 Male, age 74, both hemispheres 128.7
2045 Male, age 76, both hemispheres 127.3
2082 Female, age 91, right hemisphere 123.4
Hippocampus, CA2
nTPM: 137.6
1892 Male, age 76, both hemispheres 149.5
1963 Male, age 80, left hemisphere 149.1
2249 Male, age 74, both hemispheres 138.9
1940 Female, age 85, left hemisphere 132.2
2437 Female, age 94, left hemisphere 129.6
2113 Female, age 91, right hemisphere 126.3
Hippocampus, CA3
nTPM: 129.3
2137 Male, age 80, left hemisphere 145.8
1867 Male, age 76, both hemispheres 144.8
1891 Female, age 85, both hemispheres 137.5
2436 Male, age 74, both hemispheres 129.7
2861 Female, age 67, both hemispheres 110.2
2620 Female, age 94, left hemisphere 107.8
Parahippocampal cortex
nTPM: 128.1
1850 Male, age 80, both hemispheres 147.8
1933 Female, age 85, both hemispheres 133.4
1990 Female, age 91, right hemisphere 133.2
2018 Male, age 76, both hemispheres 131.2
2692 Male, age 74, both hemispheres 129.1
2532 Female, age 72, left hemisphere 127.4
2245 Female, age 91, both hemispheres 126.4
2250 Female, age 67, right hemisphere 124.7
2693 Female, age 94, both hemispheres 116.1
2622 Female, age 67, right hemisphere 111.5
Perirhinal gyrus
nTPM: 134.5
1794 Male, age 80, right hemisphere 141.7
1847 Female, age 91, left hemisphere 140.9
1841 Female, age 85, right hemisphere 140.1
2848 Male, age 76, right hemisphere 125.8
2521 Female, age 94, right hemisphere 124.1
Subiculum
nTPM: 133.3
1901 Male, age 80, both hemispheres 145.5
2438 Female, age 94, left hemisphere 139.4
1977 Female, age 85, both hemispheres 133.3
2042 Male, age 76, both hemispheres 133.3
2729 Female, age 91, right hemisphere 124.6
2619 Male, age 74, both hemispheres 123.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 126.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.8
Samples: 197

Max nTPM: 238.6
Min nTPM: 76.0
Std nTPM: 28.6
Median nTPM: 121.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 238.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 231.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 221.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 216.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 212.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 202.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 189.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 189.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 187.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 184.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 182.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 409.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 409.1
FF:10169-103B7 60 years, female 437.3
FF:10153-102I9 76 years, female 380.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 141.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 141.2
Samples: 4

Max nTPM: 170.8
Min nTPM: 108.0
Sample A Female 170.8
Sample B Female 138.5
Sample C Male 147.3
Sample D Male 108.0
Entorhinal cortex
nTPM: 123.3
Samples: 4

Max nTPM: 156.2
Min nTPM: 98.3
Sample A Female 115.9
Sample B Female 156.2
Sample C Male 122.6
Sample D Male 98.3
Subiculum
nTPM: 122.4
Samples: 4

Max nTPM: 155.9
Min nTPM: 107.4
Sample A Female 155.9
Sample B Female 112.7
Sample C Male 107.4
Sample D Male 113.5
Ventral hippocampus
nTPM: 118.5
Samples: 4

Max nTPM: 136.2
Min nTPM: 106.6
Sample A Female 136.2
Sample B Female 107.9
Sample C Male 106.6
Sample D Male 123.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.1
Samples: 4

Max nTPM: 101.4
Min nTPM: 97.3
Sample A Male 101.4
Sample B Male 97.3
Sample C Female 98.7
Sample D Female 99.1
Hippocampal formation
nTPM: 104.0
Samples: 4

Max nTPM: 110.2
Min nTPM: 96.0
Sample A Male 104.5
Sample B Male 105.3
Sample C Female 110.2
Sample D Female 96.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
72182999 Antisense, RP_050927_03_B03, Mouse strain C57BL/6J (56 days, male) 15.8

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