HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:124.3 nTPM
HPA:124.3 nTPM
GTEx:198.2 nTPM
FANTOM5:161.3 Scaled Tags Per Million
Pig:90.1 nTPM
Mouse:150.1 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002490
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.3
Sample id Sample description nTPM
Hippocampus
nTPM: 117.0
1911 Female, age 85, right hemisphere 128.1
2529 Female, age 94, left hemisphere 116.6
1898 Male, age 80, left hemisphere 116.4
2621 Female, age 67, right hemisphere 114.4
1855 Male, age 76, left hemisphere 114.3
2148 Female, age 91, left hemisphere 112.1
Dentate gyrus
nTPM: 115.5
2530 Female, age 94, left hemisphere 133.2
2528 Male, age 74, both hemispheres 131.2
2010 Male, age 76, both hemispheres 117.1
1927 Female, age 91, both hemispheres 105.1
2531 Female, age 67, both hemispheres 103.3
2246 Female, age 85, both hemispheres 103.1
Entorhinal gyrus
nTPM: 114.8
2117 Female, age 91, right hemisphere 153.9
2764 Male, age 80, right hemisphere 117.9
1938 Female, age 85, left hemisphere 109.7
1787 Male, age 76, left hemisphere 109.2
2613 Female, age 94, left hemisphere 101.0
2686 Male, age 75, right hemisphere 96.8
Hippocampus, CA1
nTPM: 106.6
2527 Male, age 74, both hemispheres 114.4
1873 Female, age 85, both hemispheres 111.7
2082 Female, age 91, right hemisphere 106.8
2749 Male, age 80, left hemisphere 103.3
2045 Male, age 76, both hemispheres 97.0
Hippocampus, CA2
nTPM: 117.7
2249 Male, age 74, both hemispheres 141.3
1963 Male, age 80, left hemisphere 129.7
2113 Female, age 91, right hemisphere 112.6
1940 Female, age 85, left hemisphere 112.5
2437 Female, age 94, left hemisphere 110.9
1892 Male, age 76, both hemispheres 99.1
Hippocampus, CA3
nTPM: 109.4
1891 Female, age 85, both hemispheres 129.2
2436 Male, age 74, both hemispheres 119.2
1867 Male, age 76, both hemispheres 111.1
2620 Female, age 94, left hemisphere 106.5
2137 Male, age 80, left hemisphere 96.2
2861 Female, age 67, both hemispheres 94.4
Parahippocampal cortex
nTPM: 102.8
1990 Female, age 91, right hemisphere 115.1
2532 Female, age 72, left hemisphere 112.6
2018 Male, age 76, both hemispheres 107.1
2692 Male, age 74, both hemispheres 107.0
1933 Female, age 85, both hemispheres 105.2
1850 Male, age 80, both hemispheres 102.6
2245 Female, age 91, both hemispheres 102.5
2250 Female, age 67, right hemisphere 96.5
2693 Female, age 94, both hemispheres 93.3
2622 Female, age 67, right hemisphere 86.5
Perirhinal gyrus
nTPM: 93.4
1847 Female, age 91, left hemisphere 94.4
1794 Male, age 80, right hemisphere 94.2
2521 Female, age 94, right hemisphere 93.9
2848 Male, age 76, right hemisphere 93.2
1841 Female, age 85, right hemisphere 91.3
Subiculum
nTPM: 124.3
1901 Male, age 80, both hemispheres 137.3
2042 Male, age 76, both hemispheres 135.4
1977 Female, age 85, both hemispheres 122.5
2729 Female, age 91, right hemisphere 121.8
2438 Female, age 94, left hemisphere 116.1
2619 Male, age 74, both hemispheres 112.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 198.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 198.2
Samples: 197

Max nTPM: 572.5
Min nTPM: 37.0
Std nTPM: 99.8
Median nTPM: 176.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 572.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 567.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 539.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 478.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 445.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 404.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 390.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 387.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 383.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 382.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 380.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.3
FF:10153-102I9 76 years, female 185.5
FF:10169-103B7 60 years, female 137.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.1
Samples: 4

Max nTPM: 149.1
Min nTPM: 29.3
Sample A Female 149.1
Sample B Female 59.9
Sample C Male 122.1
Sample D Male 29.3
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 42.8
Min nTPM: 28.7
Sample A Female 34.7
Sample B Female 42.8
Sample C Male 41.6
Sample D Male 28.7
Subiculum
nTPM: 48.5
Samples: 4

Max nTPM: 57.3
Min nTPM: 42.3
Sample A Female 57.3
Sample B Female 48.7
Sample C Male 42.3
Sample D Male 45.7
Ventral hippocampus
nTPM: 65.6
Samples: 4

Max nTPM: 76.3
Min nTPM: 36.6
Sample A Female 74.8
Sample B Female 36.6
Sample C Male 74.7
Sample D Male 76.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 150.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.8
Samples: 4

Max nTPM: 109.8
Min nTPM: 62.8
Sample A Male 109.8
Sample B Male 81.8
Sample C Female 100.6
Sample D Female 62.8
Hippocampal formation
nTPM: 150.1
Samples: 4

Max nTPM: 177.7
Min nTPM: 124.7
Sample A Male 124.7
Sample B Male 126.5
Sample C Female 177.7
Sample D Female 171.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69540635 Antisense, RP_050426_02_B06, Mouse strain C57BL/6J (56 days, male) 3.9
73520971 Antisense, RP_051017_04_E11, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

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