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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:139.2 nTPM
HPA:139.2 nTPM
GTEx:315.0 nTPM
FANTOM5:324.8 Scaled Tags Per Million
Pig:227.5 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 139.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 126.7
1981 Female, age 72, midline 152.7
2048 Male, age 55, midline 126.3
2816 Male, age 47, midline 121.6
2194 Female, age 79, both hemispheres 116.7
2565 Male, age 75, midline 116.4
Cervical spinal cord, dorsal horn
nTPM: 139.2
2296 Male, age 66, both hemispheres 173.5
2173 Female, age 72, unknown 168.5
2069 Male, age 47, both hemispheres 146.1
1877 Male, age 55, unknown 125.6
2297 Male, age 75, both hemispheres 113.9
2721 Male, age 90, both hemispheres 107.6
Cervical spinal cord, ventral horn
nTPM: 129.2
2098 Female, age 72, unknown 164.9
2809 Male, age 90, both hemispheres 133.8
2068 Male, age 55, unknown 128.2
2480 Male, age 75, both hemispheres 121.2
2295 Male, age 66, both hemispheres 114.8
2820 Female, age 79, both hemispheres 112.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 315.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 315.0
Samples: 159

Max nTPM: 1113.0
Min nTPM: 77.0
Std nTPM: 127.2
Median nTPM: 293.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1113.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 675.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 645.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 612.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 605.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 572.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 554.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 511.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 496.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 484.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 475.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 467.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 464.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 460.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 458.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 456.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 450.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 449.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 445.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 435.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 432.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 428.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 423.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 422.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 418.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 417.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 416.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 416.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 415.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 414.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 408.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 406.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 405.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 404.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 400.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 397.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 391.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 389.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 389.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 386.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 381.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 381.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 381.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 380.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 373.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 372.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 371.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 364.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 362.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 361.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 356.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 356.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 351.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 348.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 344.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 343.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 341.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 340.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 337.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 336.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 332.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 332.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 332.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 329.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 326.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 326.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 324.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 323.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 319.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 319.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 318.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 317.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 315.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 315.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 314.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 306.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 305.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 304.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 298.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 293.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 293.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 291.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 291.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 289.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 288.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 288.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 286.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 282.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 281.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 281.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 279.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 279.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 279.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 277.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 276.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 275.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 268.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 263.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 258.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 253.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 252.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 251.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 251.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 250.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 247.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 247.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 247.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 246.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 243.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 240.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 239.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 232.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 231.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 230.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 230.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 229.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 228.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 228.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 228.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 227.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 224.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 222.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 221.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 220.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 220.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 220.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 215.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 212.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 211.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 211.3
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 210.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 204.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 204.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 204.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 203.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 200.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 199.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 199.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 195.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 187.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 187.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 184.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 183.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 182.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 181.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 180.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 178.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 176.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 172.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 164.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 163.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 159.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 157.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 149.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 141.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 131.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 94.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 87.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 77.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 324.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 324.8
FF:10181-103D1 60 years, female 448.3
FF:10159-103A6 76 years, female 201.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 227.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 227.5
Samples: 4

Max nTPM: 297.6
Min nTPM: 181.1
Sample A Female 181.1
Sample B Female 223.9
Sample C Male 297.6
Sample D Male 207.4
Ventral spinal cord
nTPM: 219.0
Samples: 4

Max nTPM: 279.5
Min nTPM: 191.4
Sample A Female 195.5
Sample B Female 191.4
Sample C Male 209.5
Sample D Male 279.5

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