COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:54.6 nTPM
HPA:16.0 nTPM
GTEx:54.6 nTPM
FANTOM5:23.4 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 16.0
overview
Male, age 54 		Colon sample 67
nTPM: 12.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 12.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 11.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 10
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 9.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 24.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 20.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 15.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 23
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 17.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 15.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 17.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 18.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 54.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 54.6
Samples: 373

Max nTPM: 116.6
Min nTPM: 15.7
Std nTPM: 15.6
Median nTPM: 53.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 116.6
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 107.4
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 94.5
GTEX-1GZ4H-1326-SM-7P8TE 50-59 years, female 91.9
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 90.7
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 88.6
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 88.5
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 86.4
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 85.9
GTEX-1J1OQ-2826-SM-D3L88 40-49 years, female 85.9
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 85.0
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Colon - Transverse
Average nTPM: 31.2
Samples: 406

Max nTPM: 76.2
Min nTPM: 11.1
Std nTPM: 13.1
Median nTPM: 27.9
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 76.2
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 72.4
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 72.0
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 70.7
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 68.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 66.2
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 63.9
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 63.7
GTEX-14E1K-1826-SM-793DT 50-59 years, male 63.6
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 62.7
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 62.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 23.4
FF:10014-101C5 62,83,84 years, mixed 23.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.