We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
DCN
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • DCN
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:783.7 nTPM
GTEx:783.7 nTPM
FANTOM5:1237.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003315Antibody HPA064736Antibody CAB017118Antibody CAB068930
Squamous epithelial cells Not detectedLowNot detectedLow






VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 783.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 783.7
Samples: 156

Max nTPM: 2237.2
Min nTPM: 125.3
Std nTPM: 419.0
Median nTPM: 721.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2237.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 2097.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 2022.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1919.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1800.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1736.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1715.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1668.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1628.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1558.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1456.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1445.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1414.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1398.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1333.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1322.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1321.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1319.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1297.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1280.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1249.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1220.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1203.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1199.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1186.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1184.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1165.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1131.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1129.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1125.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1115.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1057.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 1033.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1030.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1018.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 997.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 992.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 982.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 967.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 959.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 956.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 954.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 951.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 941.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 931.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 929.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 924.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 921.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 918.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 918.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 916.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 910.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 906.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 905.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 896.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 894.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 887.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 877.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 861.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 850.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 839.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 821.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 799.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 794.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 793.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 793.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 791.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 782.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 770.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 763.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 756.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 754.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 749.6
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 734.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 734.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 732.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 727.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 726.9
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 716.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 714.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 709.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 704.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 700.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 695.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 674.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 667.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 663.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 663.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 658.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 651.4
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 642.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 632.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 631.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 626.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 623.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 623.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 603.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 594.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 592.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 592.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 581.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 579.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 571.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 570.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 564.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 549.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 535.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 527.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 517.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 514.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 513.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 508.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 507.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 504.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 503.5
GTEX-QCQG-1226-SM-48U23 50-59 years, female 491.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 486.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 480.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 476.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 468.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 468.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 462.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 436.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 432.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 430.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 428.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 425.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 406.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 406.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 405.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 402.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 353.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 352.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 334.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 329.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 319.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 315.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 315.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 312.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 296.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 295.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 294.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 293.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 291.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 287.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 270.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 257.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 234.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 232.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 212.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 206.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 197.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 196.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 187.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 157.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 125.3
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1237.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1237.4
FF:10204-103F6 68 years, female 1237.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.