COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.2 nTPM
HPA:7.6 nTPM
GTEx:22.2 nTPM
FANTOM5:37.6 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 7.6
overview
Male, age 54 		Colon sample 67
nTPM: 16.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 15.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 13.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 0
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 0
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 19.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 21.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 13.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 0
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 22.2
Samples: 373

Max nTPM: 58.5
Min nTPM: 0.0
Std nTPM: 17.6
Median nTPM: 28.3
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 58.5
GTEX-144GM-1126-SM-79OJK 20-29 years, male 58.3
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 57.9
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 57.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 55.1
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 54.3
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 53.4
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 52.4
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 52.2
GTEX-1N2DV-1826-SM-E6CJ5 40-49 years, male 51.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 51.1
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Colon - Transverse
Average nTPM: 18.3
Samples: 406

Max nTPM: 59.2
Min nTPM: 0.0
Std nTPM: 14.8
Median nTPM: 22.6
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 59.2
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 58.2
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 51.9
GTEX-17EUY-1826-SM-7DUEZ 20-29 years, male 45.8
GTEX-17GQL-1526-SM-7LTAC 60-69 years, male 44.7
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 44.6
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 43.8
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 42.6
GTEX-QEL4-1926-SM-D3L8D 50-59 years, male 42.5
GTEX-18D9B-2526-SM-718BN 60-69 years, male 42.4
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 42.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 37.6
FF:10014-101C5 62,83,84 years, mixed 37.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.