HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.9 nTPM
HPA:40.9 nTPM
GTEx:37.0 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:74.8 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056417
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 40.0
2529 Female, age 94, left hemisphere 41.6
1898 Male, age 80, left hemisphere 41.4
2621 Female, age 67, right hemisphere 40.2
1911 Female, age 85, right hemisphere 40.0
1855 Male, age 76, left hemisphere 38.6
2148 Female, age 91, left hemisphere 38.3
Dentate gyrus
nTPM: 39.6
2530 Female, age 94, left hemisphere 42.3
2010 Male, age 76, both hemispheres 41.2
2528 Male, age 74, both hemispheres 40.1
2246 Female, age 85, both hemispheres 39.4
1927 Female, age 91, both hemispheres 37.9
2531 Female, age 67, both hemispheres 36.9
Entorhinal gyrus
nTPM: 40.6
2117 Female, age 91, right hemisphere 44.0
1938 Female, age 85, left hemisphere 41.6
1787 Male, age 76, left hemisphere 41.4
2764 Male, age 80, right hemisphere 40.1
2613 Female, age 94, left hemisphere 38.3
2686 Male, age 75, right hemisphere 38.0
Hippocampus, CA1
nTPM: 39.9
2749 Male, age 80, left hemisphere 42.4
2527 Male, age 74, both hemispheres 41.0
2082 Female, age 91, right hemisphere 39.6
1873 Female, age 85, both hemispheres 38.4
2045 Male, age 76, both hemispheres 38.2
Hippocampus, CA2
nTPM: 40.9
2249 Male, age 74, both hemispheres 44.0
1963 Male, age 80, left hemisphere 40.7
2113 Female, age 91, right hemisphere 40.6
1940 Female, age 85, left hemisphere 40.4
2437 Female, age 94, left hemisphere 40.1
1892 Male, age 76, both hemispheres 39.3
Hippocampus, CA3
nTPM: 39.5
2436 Male, age 74, both hemispheres 42.5
1891 Female, age 85, both hemispheres 42.2
1867 Male, age 76, both hemispheres 40.2
2137 Male, age 80, left hemisphere 38.4
2620 Female, age 94, left hemisphere 37.8
2861 Female, age 67, both hemispheres 36.0
Parahippocampal cortex
nTPM: 39.4
1990 Female, age 91, right hemisphere 41.5
2018 Male, age 76, both hemispheres 40.6
1933 Female, age 85, both hemispheres 40.5
2250 Female, age 67, right hemisphere 40.2
2532 Female, age 72, left hemisphere 40.2
1850 Male, age 80, both hemispheres 39.9
2692 Male, age 74, both hemispheres 39.6
2245 Female, age 91, both hemispheres 38.4
2693 Female, age 94, both hemispheres 36.8
2622 Female, age 67, right hemisphere 36.5
Perirhinal gyrus
nTPM: 39.9
1847 Female, age 91, left hemisphere 41.3
1841 Female, age 85, right hemisphere 40.6
1794 Male, age 80, right hemisphere 39.4
2521 Female, age 94, right hemisphere 39.4
2848 Male, age 76, right hemisphere 38.8
Subiculum
nTPM: 40.8
1977 Female, age 85, both hemispheres 43.0
2042 Male, age 76, both hemispheres 42.4
1901 Male, age 80, both hemispheres 42.1
2729 Female, age 91, right hemisphere 40.7
2619 Male, age 74, both hemispheres 40.0
2438 Female, age 94, left hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.0
Samples: 197

Max nTPM: 67.1
Min nTPM: 22.3
Std nTPM: 8.0
Median nTPM: 36.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 67.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 63.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 61.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 60.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 57.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 52.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 51.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 51.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 50.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 50.0
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 49.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10153-102I9 76 years, female 27.3
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 21.4
Min nTPM: 12.7
Sample A Female 21.4
Sample B Female 14.6
Sample C Male 13.2
Sample D Male 12.7
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.2
Sample A Female 16.7
Sample B Female 16.9
Sample C Male 12.7
Sample D Male 11.2
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 18.7
Min nTPM: 12.2
Sample A Female 18.7
Sample B Female 13.6
Sample C Male 13.1
Sample D Male 12.2
Ventral hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.1
Sample A Female 14.6
Sample B Female 11.1
Sample C Male 15.0
Sample D Male 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.4
Samples: 4

Max nTPM: 55.7
Min nTPM: 40.7
Sample A Male 49.2
Sample B Male 43.9
Sample C Female 55.7
Sample D Female 40.7
Hippocampal formation
nTPM: 74.9
Samples: 4

Max nTPM: 82.9
Min nTPM: 65.3
Sample A Male 77.2
Sample B Male 74.1
Sample C Female 82.9
Sample D Female 65.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
70431349 Antisense, RP_050614_02_F07, Mouse strain C57BL/6J (56 days, male) 9.9
74988456 Antisense, RP_060315_05_D11, Mouse strain C57BL/6J (56 days, male) 7.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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