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MDH1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:231.2 nTPM
FANTOM5:288.9 Scaled Tags Per Million
Pig:278.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA027296Antibody HPA054276Antibody CAB047333
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumMediumMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 231.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 231.2
Samples: 246

Max nTPM: 629.0
Min nTPM: 55.3
Std nTPM: 119.9
Median nTPM: 214.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 629.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 597.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 550.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 535.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 506.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 503.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 494.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 475.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 472.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 470.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 462.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 451.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 450.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 446.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 433.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 431.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 419.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 416.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 415.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 409.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 406.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 404.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 393.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 393.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 392.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 390.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 387.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 383.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 383.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 382.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 377.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 374.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 370.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 369.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 368.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 367.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 366.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 364.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 360.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 360.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 356.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 351.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 348.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 343.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 343.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 342.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 341.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 340.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 340.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 339.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 338.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 334.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 330.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 330.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 330.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 329.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 328.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 322.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 319.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 319.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 314.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 314.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 313.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 313.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 313.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 312.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 312.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 312.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 310.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 309.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 308.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 308.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 305.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 302.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 299.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 297.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 293.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 293.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 292.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 289.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 287.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 285.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 284.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 280.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 278.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 277.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 273.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 269.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 267.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 267.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 265.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 262.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 262.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 260.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 259.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 256.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 254.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 254.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 252.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 251.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 248.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 245.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 245.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 243.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 241.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 238.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 232.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 229.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 228.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 227.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 227.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 226.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 226.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 224.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 223.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 222.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 222.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 221.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 221.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 219.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 217.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 216.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 215.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 213.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 213.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 213.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 212.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 211.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 210.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 207.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 206.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 205.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 202.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 199.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 198.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 198.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 196.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 194.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 190.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 186.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 185.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 184.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 184.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 183.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 180.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 178.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 176.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 173.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 173.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 170.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 170.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 164.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 163.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 163.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 162.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 160.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 157.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 157.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 155.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 152.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 152.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 152.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 151.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 151.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 150.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 150.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 149.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 148.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 146.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 146.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 146.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 145.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 143.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 142.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 138.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 137.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 137.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 136.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 136.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 133.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 132.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 132.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 130.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 130.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 130.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 128.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 127.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 124.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 120.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 117.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 115.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 114.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 113.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 112.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 112.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 112.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 111.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 110.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 109.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 108.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 108.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 106.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 106.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 106.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 106.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 104.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 104.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 102.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 101.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 100.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 100.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 100.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 98.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 98.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 94.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 93.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 92.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 92.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 92.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 91.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 89.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 86.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 85.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 85.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 85.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 85.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 84.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 82.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 81.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 80.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 79.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 78.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 78.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 77.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 77.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 76.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 70.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 62.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 58.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 288.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 288.9
FF:10164-103B2 76 years, female 288.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 278.8
Pig sample Sample description nTPM
Caudate
nTPM: 278.8
Samples: 4

Max nTPM: 330.9
Min nTPM: 242.0
Sample A Female 242.0
Sample B Female 259.2
Sample C Male 330.9
Sample D Male 283.1

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