HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:148.1 nTPM
HPA:148.1 nTPM
GTEx:206.6 nTPM
FANTOM5:81.7 Scaled Tags Per Million
Pig:160.3 nTPM
Mouse:315.7 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 148.1
Sample id Sample description nTPM
Hippocampus
nTPM: 116.7
1911 Female, age 85, right hemisphere 132.3
2621 Female, age 67, right hemisphere 126.0
1898 Male, age 80, left hemisphere 120.0
2529 Female, age 94, left hemisphere 111.1
2148 Female, age 91, left hemisphere 108.8
1855 Male, age 76, left hemisphere 102.3
Dentate gyrus
nTPM: 126.6
2530 Female, age 94, left hemisphere 146.9
2531 Female, age 67, both hemispheres 143.3
2246 Female, age 85, both hemispheres 128.7
2010 Male, age 76, both hemispheres 115.4
2528 Male, age 74, both hemispheres 112.8
1927 Female, age 91, both hemispheres 112.6
Entorhinal gyrus
nTPM: 148.1
1938 Female, age 85, left hemisphere 162.5
2686 Male, age 75, right hemisphere 161.4
2764 Male, age 80, right hemisphere 147.9
2613 Female, age 94, left hemisphere 143.6
2117 Female, age 91, right hemisphere 140.6
1787 Male, age 76, left hemisphere 132.7
Hippocampus, CA1
nTPM: 119.9
2749 Male, age 80, left hemisphere 147.9
2527 Male, age 74, both hemispheres 120.8
1873 Female, age 85, both hemispheres 113.4
2082 Female, age 91, right hemisphere 110.6
2045 Male, age 76, both hemispheres 107.0
Hippocampus, CA2
nTPM: 122.3
1940 Female, age 85, left hemisphere 135.8
2437 Female, age 94, left hemisphere 126.9
1892 Male, age 76, both hemispheres 126.2
2249 Male, age 74, both hemispheres 125.0
1963 Male, age 80, left hemisphere 113.0
2113 Female, age 91, right hemisphere 106.8
Hippocampus, CA3
nTPM: 125.0
2137 Male, age 80, left hemisphere 144.5
1867 Male, age 76, both hemispheres 140.4
1891 Female, age 85, both hemispheres 134.6
2620 Female, age 94, left hemisphere 116.3
2861 Female, age 67, both hemispheres 110.6
2436 Male, age 74, both hemispheres 103.3
Parahippocampal cortex
nTPM: 129.4
2532 Female, age 72, left hemisphere 148.3
1933 Female, age 85, both hemispheres 146.8
1850 Male, age 80, both hemispheres 138.6
1990 Female, age 91, right hemisphere 135.7
2245 Female, age 91, both hemispheres 128.1
2692 Male, age 74, both hemispheres 124.9
2250 Female, age 67, right hemisphere 121.2
2622 Female, age 67, right hemisphere 118.1
2693 Female, age 94, both hemispheres 117.0
2018 Male, age 76, both hemispheres 114.9
Perirhinal gyrus
nTPM: 137.3
2521 Female, age 94, right hemisphere 140.9
1841 Female, age 85, right hemisphere 140.1
1847 Female, age 91, left hemisphere 139.6
1794 Male, age 80, right hemisphere 135.6
2848 Male, age 76, right hemisphere 130.1
Subiculum
nTPM: 137.0
1977 Female, age 85, both hemispheres 162.2
1901 Male, age 80, both hemispheres 160.2
2042 Male, age 76, both hemispheres 143.1
2438 Female, age 94, left hemisphere 134.3
2619 Male, age 74, both hemispheres 117.3
2729 Female, age 91, right hemisphere 105.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 206.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 206.6
Samples: 197

Max nTPM: 561.2
Min nTPM: 49.5
Std nTPM: 88.4
Median nTPM: 188.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 561.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 489.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 468.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 420.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 414.1
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 400.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 388.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 383.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 379.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 368.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 365.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.7
FF:10153-102I9 76 years, female 82.9
FF:10169-103B7 60 years, female 80.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 160.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 160.3
Samples: 4

Max nTPM: 233.2
Min nTPM: 79.4
Sample A Female 233.2
Sample B Female 126.2
Sample C Male 202.5
Sample D Male 79.4
Entorhinal cortex
nTPM: 134.3
Samples: 4

Max nTPM: 143.8
Min nTPM: 126.9
Sample A Female 136.1
Sample B Female 143.8
Sample C Male 126.9
Sample D Male 130.5
Subiculum
nTPM: 115.5
Samples: 4

Max nTPM: 147.7
Min nTPM: 94.1
Sample A Female 147.7
Sample B Female 111.6
Sample C Male 94.1
Sample D Male 108.6
Ventral hippocampus
nTPM: 103.5
Samples: 4

Max nTPM: 137.5
Min nTPM: 75.4
Sample A Female 101.6
Sample B Female 75.4
Sample C Male 99.3
Sample D Male 137.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 315.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 315.7
Samples: 4

Max nTPM: 358.5
Min nTPM: 285.4
Sample A Male 326.4
Sample B Male 358.5
Sample C Female 292.4
Sample D Female 285.4
Hippocampal formation
nTPM: 269.7
Samples: 4

Max nTPM: 290.9
Min nTPM: 248.2
Sample A Male 284.2
Sample B Male 248.2
Sample C Female 290.9
Sample D Female 255.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
1007 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 9.4
1006 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 8.9
1008 Sense, RPS_Baylor_37084, Mouse strain C57BL/6J (56 days, male) 0.9

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