HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.3 nTPM
HPA:42.3 nTPM
GTEx:38.0 nTPM
FANTOM5:117.4 Scaled Tags Per Million
Pig:28.9 nTPM
Mouse:32.6 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037959Antibody HPA038448
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.5
2529 Female, age 94, left hemisphere 38.1
1911 Female, age 85, right hemisphere 35.1
2621 Female, age 67, right hemisphere 22.2
2148 Female, age 91, left hemisphere 21.2
1855 Male, age 76, left hemisphere 18.8
1898 Male, age 80, left hemisphere 17.6
Dentate gyrus
nTPM: 25.2
2530 Female, age 94, left hemisphere 46.4
2528 Male, age 74, both hemispheres 27.2
2246 Female, age 85, both hemispheres 25.4
2010 Male, age 76, both hemispheres 24.3
2531 Female, age 67, both hemispheres 16.7
1927 Female, age 91, both hemispheres 11.0
Entorhinal gyrus
nTPM: 29.8
2117 Female, age 91, right hemisphere 46.5
2764 Male, age 80, right hemisphere 41.2
2686 Male, age 75, right hemisphere 27.9
2613 Female, age 94, left hemisphere 22.0
1938 Female, age 85, left hemisphere 21.0
1787 Male, age 76, left hemisphere 20.5
Hippocampus, CA1
nTPM: 19.8
2082 Female, age 91, right hemisphere 29.9
2527 Male, age 74, both hemispheres 27.3
1873 Female, age 85, both hemispheres 22.6
2749 Male, age 80, left hemisphere 11.6
2045 Male, age 76, both hemispheres 7.7
Hippocampus, CA2
nTPM: 25.9
2249 Male, age 74, both hemispheres 33.2
2437 Female, age 94, left hemisphere 32.0
2113 Female, age 91, right hemisphere 30.3
1963 Male, age 80, left hemisphere 28.7
1940 Female, age 85, left hemisphere 22.6
1892 Male, age 76, both hemispheres 8.8
Hippocampus, CA3
nTPM: 17.5
1891 Female, age 85, both hemispheres 42.3
1867 Male, age 76, both hemispheres 22.3
2436 Male, age 74, both hemispheres 16.9
2620 Female, age 94, left hemisphere 9.4
2137 Male, age 80, left hemisphere 8.5
2861 Female, age 67, both hemispheres 5.7
Parahippocampal cortex
nTPM: 21.9
2692 Male, age 74, both hemispheres 43.6
2532 Female, age 72, left hemisphere 33.1
1990 Female, age 91, right hemisphere 32.2
2018 Male, age 76, both hemispheres 24.7
1850 Male, age 80, both hemispheres 22.2
2245 Female, age 91, both hemispheres 19.0
1933 Female, age 85, both hemispheres 16.6
2693 Female, age 94, both hemispheres 12.6
2250 Female, age 67, right hemisphere 8.7
2622 Female, age 67, right hemisphere 6.5
Perirhinal gyrus
nTPM: 11.0
2521 Female, age 94, right hemisphere 14.9
1794 Male, age 80, right hemisphere 14.5
2848 Male, age 76, right hemisphere 10.8
1847 Female, age 91, left hemisphere 10.0
1841 Female, age 85, right hemisphere 5.0
Subiculum
nTPM: 42.3
2042 Male, age 76, both hemispheres 61.4
1901 Male, age 80, both hemispheres 50.9
2438 Female, age 94, left hemisphere 42.6
2619 Male, age 74, both hemispheres 37.9
1977 Female, age 85, both hemispheres 35.2
2729 Female, age 91, right hemisphere 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.0
Samples: 197

Max nTPM: 138.1
Min nTPM: 4.8
Std nTPM: 23.4
Median nTPM: 31.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 138.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 120.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 105.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 101.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 98.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 96.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 96.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 95.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 90.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 89.3
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 83.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.4
FF:10153-102I9 76 years, female 157.4
FF:10169-103B7 60 years, female 77.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 38.6
Min nTPM: 15.3
Sample A Female 37.5
Sample B Female 24.2
Sample C Male 38.6
Sample D Male 15.3
Entorhinal cortex
nTPM: 16.4
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.6
Sample A Female 15.3
Sample B Female 16.6
Sample C Male 14.6
Sample D Male 19.2
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 19.7
Min nTPM: 18.1
Sample A Female 18.1
Sample B Female 19.7
Sample C Male 18.2
Sample D Male 19.5
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 17.2
Sample A Female 25.1
Sample B Female 17.2
Sample C Male 26.5
Sample D Male 34.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 33.5
Min nTPM: 12.9
Sample A Male 33.5
Sample B Male 24.6
Sample C Female 21.7
Sample D Female 12.9
Hippocampal formation
nTPM: 32.6
Samples: 4

Max nTPM: 37.2
Min nTPM: 24.7
Sample A Male 24.7
Sample B Male 32.8
Sample C Female 35.6
Sample D Female 37.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
69169851 Antisense, RP_050321_04_C12, Mouse strain C57BL/6J (56 days, male) 5.4

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