HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:130.8 nTPM
HPA:130.8 nTPM
GTEx:112.6 nTPM
FANTOM5:85.2 Scaled Tags Per Million
Pig:48.8 nTPM
Mouse:58.3 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001040Antibody HPA001391Antibody CAB020817
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 130.8
Sample id Sample description nTPM
Hippocampus
nTPM: 115.9
2148 Female, age 91, left hemisphere 126.4
1855 Male, age 76, left hemisphere 120.5
1898 Male, age 80, left hemisphere 118.5
1911 Female, age 85, right hemisphere 112.6
2529 Female, age 94, left hemisphere 109.5
2621 Female, age 67, right hemisphere 107.8
Dentate gyrus
nTPM: 119.0
1927 Female, age 91, both hemispheres 130.7
2528 Male, age 74, both hemispheres 128.5
2246 Female, age 85, both hemispheres 123.4
2531 Female, age 67, both hemispheres 123.2
2010 Male, age 76, both hemispheres 113.8
2530 Female, age 94, left hemisphere 94.6
Entorhinal gyrus
nTPM: 98.4
1938 Female, age 85, left hemisphere 104.3
1787 Male, age 76, left hemisphere 103.7
2117 Female, age 91, right hemisphere 102.2
2764 Male, age 80, right hemisphere 99.3
2686 Male, age 75, right hemisphere 90.9
2613 Female, age 94, left hemisphere 90.0
Hippocampus, CA1
nTPM: 130.8
2749 Male, age 80, left hemisphere 144.0
2045 Male, age 76, both hemispheres 137.1
1873 Female, age 85, both hemispheres 130.9
2082 Female, age 91, right hemisphere 125.2
2527 Male, age 74, both hemispheres 117.1
Hippocampus, CA2
nTPM: 110.6
2249 Male, age 74, both hemispheres 119.4
1892 Male, age 76, both hemispheres 116.1
2113 Female, age 91, right hemisphere 112.8
1963 Male, age 80, left hemisphere 112.4
1940 Female, age 85, left hemisphere 105.5
2437 Female, age 94, left hemisphere 97.5
Hippocampus, CA3
nTPM: 118.5
2620 Female, age 94, left hemisphere 137.7
2137 Male, age 80, left hemisphere 134.2
2436 Male, age 74, both hemispheres 113.7
1867 Male, age 76, both hemispheres 111.1
1891 Female, age 85, both hemispheres 107.5
2861 Female, age 67, both hemispheres 106.9
Parahippocampal cortex
nTPM: 107.4
2250 Female, age 67, right hemisphere 128.6
2245 Female, age 91, both hemispheres 112.0
1933 Female, age 85, both hemispheres 111.2
2693 Female, age 94, both hemispheres 107.5
2018 Male, age 76, both hemispheres 106.9
1850 Male, age 80, both hemispheres 105.7
1990 Female, age 91, right hemisphere 103.3
2622 Female, age 67, right hemisphere 101.8
2532 Female, age 72, left hemisphere 100.6
2692 Male, age 74, both hemispheres 96.8
Perirhinal gyrus
nTPM: 116.9
1847 Female, age 91, left hemisphere 127.7
2521 Female, age 94, right hemisphere 118.0
1841 Female, age 85, right hemisphere 117.1
1794 Male, age 80, right hemisphere 115.8
2848 Male, age 76, right hemisphere 106.1
Subiculum
nTPM: 103.8
2729 Female, age 91, right hemisphere 125.2
1977 Female, age 85, both hemispheres 108.9
2619 Male, age 74, both hemispheres 102.9
1901 Male, age 80, both hemispheres 100.9
2042 Male, age 76, both hemispheres 93.5
2438 Female, age 94, left hemisphere 91.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 112.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.6
Samples: 197

Max nTPM: 236.9
Min nTPM: 24.3
Std nTPM: 38.4
Median nTPM: 108.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 236.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 225.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 224.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 219.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 218.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 217.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 210.3
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 199.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 194.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 185.4
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 183.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.2
FF:10169-103B7 60 years, female 92.0
FF:10153-102I9 76 years, female 78.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.8
Samples: 4

Max nTPM: 60.3
Min nTPM: 37.0
Sample A Female 60.3
Sample B Female 52.5
Sample C Male 45.3
Sample D Male 37.0
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 46.0
Min nTPM: 37.4
Sample A Female 46.0
Sample B Female 43.9
Sample C Male 43.0
Sample D Male 37.4
Subiculum
nTPM: 43.9
Samples: 4

Max nTPM: 56.1
Min nTPM: 37.4
Sample A Female 56.1
Sample B Female 41.4
Sample C Male 37.4
Sample D Male 40.6
Ventral hippocampus
nTPM: 45.2
Samples: 4

Max nTPM: 61.1
Min nTPM: 29.7
Sample A Female 39.8
Sample B Female 29.7
Sample C Male 50.3
Sample D Male 61.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.4
Samples: 4

Max nTPM: 57.3
Min nTPM: 50.8
Sample A Male 50.8
Sample B Male 56.9
Sample C Female 56.4
Sample D Female 57.3
Hippocampal formation
nTPM: 58.3
Samples: 4

Max nTPM: 62.5
Min nTPM: 51.2
Sample A Male 62.5
Sample B Male 57.1
Sample C Female 51.2
Sample D Female 62.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
2219 Antisense, RP_040604_01_A03, Mouse strain C57BL/6J (56 days, male) 3.6
2218 Antisense, RP_040604_01_A03, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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