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FHL1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:118.4 nTPM
FANTOM5:90.9 Scaled Tags Per Million
Pig:52.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001040Antibody HPA001391Antibody CAB020817
Glial cells Not detectedNot detectedLow
Neuronal cells MediumNot detectedNot detected







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 118.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 118.4
Samples: 246

Max nTPM: 207.8
Min nTPM: 56.2
Std nTPM: 24.1
Median nTPM: 114.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 207.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 200.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 199.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 181.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 180.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 169.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 168.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 166.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 166.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 162.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 162.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 161.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 160.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 158.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 158.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 157.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 157.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 156.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 154.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 153.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 152.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 150.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 150.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 150.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 149.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 148.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 147.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 147.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 147.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 146.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 145.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 145.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 144.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 143.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 143.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 142.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 142.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 142.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 142.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 141.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 141.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 141.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 140.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 139.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 138.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 138.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 137.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 137.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 136.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 136.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 135.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 135.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 135.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 135.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 134.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 134.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 134.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 134.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 133.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 133.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 132.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 132.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 132.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 132.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 131.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 131.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 131.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 130.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 129.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 129.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 129.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 128.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 128.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 128.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 128.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 127.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 127.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 127.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 126.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 126.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 126.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 126.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 126.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 126.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 125.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 125.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 125.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 125.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 124.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 124.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 123.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 123.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 123.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 123.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 123.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 123.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 122.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 122.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 121.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 121.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 120.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 120.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 120.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 120.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 119.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 119.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 119.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 118.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 117.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 117.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 117.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 117.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 116.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 116.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 115.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 115.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 115.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 115.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 115.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 114.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 114.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 114.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 113.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 113.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 113.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 113.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 113.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 112.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 112.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 112.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 112.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 112.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 112.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 111.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 111.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 111.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 111.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 111.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 110.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 110.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 110.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 109.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 109.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 109.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 109.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 109.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 108.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 108.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 108.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 108.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 107.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 107.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 107.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 107.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 107.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 106.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 106.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 106.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 105.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 105.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 105.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 104.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 104.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 104.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 104.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 104.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 103.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 103.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 103.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 103.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 103.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 102.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 102.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 102.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 102.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 101.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 101.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 101.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 100.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 100.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 100.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 99.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 99.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 99.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 99.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 99.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 99.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 99.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 98.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 98.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 98.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 98.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 97.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 97.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 97.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 97.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 95.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 95.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 94.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 94.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 94.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 93.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 93.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 93.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 92.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 92.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 92.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 90.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 90.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 89.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 89.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 89.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 88.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 88.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 88.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 88.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 87.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 86.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 86.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 86.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 86.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 85.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 84.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 84.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 84.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 81.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 81.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 80.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 77.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 76.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 71.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 69.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 56.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 90.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 90.9
FF:10164-103B2 76 years, female 90.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 52.7
Pig sample Sample description nTPM
Caudate
nTPM: 52.7
Samples: 4

Max nTPM: 57.8
Min nTPM: 46.9
Sample A Female 49.8
Sample B Female 56.2
Sample C Male 57.8
Sample D Male 46.9

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