HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:101.7 nTPM
HPA:101.7 nTPM
GTEx:91.6 nTPM
FANTOM5:221.2 Scaled Tags Per Million
Pig:72.7 nTPM
Mouse:129.5 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052643
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.7
Sample id Sample description nTPM
Hippocampus
nTPM: 98.9
2621 Female, age 67, right hemisphere 102.6
1898 Male, age 80, left hemisphere 102.3
1911 Female, age 85, right hemisphere 98.1
2529 Female, age 94, left hemisphere 97.6
2148 Female, age 91, left hemisphere 96.6
1855 Male, age 76, left hemisphere 96.4
Dentate gyrus
nTPM: 98.3
2530 Female, age 94, left hemisphere 105.1
1927 Female, age 91, both hemispheres 99.6
2010 Male, age 76, both hemispheres 99.5
2531 Female, age 67, both hemispheres 97.7
2246 Female, age 85, both hemispheres 94.7
2528 Male, age 74, both hemispheres 93.1
Entorhinal gyrus
nTPM: 98.5
2613 Female, age 94, left hemisphere 102.4
1938 Female, age 85, left hemisphere 101.3
2764 Male, age 80, right hemisphere 99.3
2686 Male, age 75, right hemisphere 96.9
1787 Male, age 76, left hemisphere 96.2
2117 Female, age 91, right hemisphere 94.8
Hippocampus, CA1
nTPM: 101.1
2749 Male, age 80, left hemisphere 119.0
1873 Female, age 85, both hemispheres 100.9
2045 Male, age 76, both hemispheres 98.5
2527 Male, age 74, both hemispheres 97.2
2082 Female, age 91, right hemisphere 90.0
Hippocampus, CA2
nTPM: 98.9
1963 Male, age 80, left hemisphere 112.9
1892 Male, age 76, both hemispheres 104.0
1940 Female, age 85, left hemisphere 95.4
2437 Female, age 94, left hemisphere 95.2
2113 Female, age 91, right hemisphere 93.0
2249 Male, age 74, both hemispheres 92.8
Hippocampus, CA3
nTPM: 101.7
2137 Male, age 80, left hemisphere 111.8
1867 Male, age 76, both hemispheres 103.2
2861 Female, age 67, both hemispheres 102.1
2620 Female, age 94, left hemisphere 99.7
1891 Female, age 85, both hemispheres 98.8
2436 Male, age 74, both hemispheres 94.3
Parahippocampal cortex
nTPM: 95.8
2245 Female, age 91, both hemispheres 99.4
1850 Male, age 80, both hemispheres 98.8
2532 Female, age 72, left hemisphere 96.9
1933 Female, age 85, both hemispheres 96.2
2018 Male, age 76, both hemispheres 95.7
2692 Male, age 74, both hemispheres 95.3
1990 Female, age 91, right hemisphere 94.8
2622 Female, age 67, right hemisphere 94.5
2250 Female, age 67, right hemisphere 94.3
2693 Female, age 94, both hemispheres 92.5
Perirhinal gyrus
nTPM: 97.4
1794 Male, age 80, right hemisphere 102.3
1847 Female, age 91, left hemisphere 99.4
1841 Female, age 85, right hemisphere 98.3
2521 Female, age 94, right hemisphere 94.4
2848 Male, age 76, right hemisphere 92.8
Subiculum
nTPM: 95.9
1901 Male, age 80, both hemispheres 99.5
1977 Female, age 85, both hemispheres 98.2
2042 Male, age 76, both hemispheres 97.3
2619 Male, age 74, both hemispheres 95.4
2438 Female, age 94, left hemisphere 94.0
2729 Female, age 91, right hemisphere 90.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.6
Samples: 197

Max nTPM: 169.7
Min nTPM: 40.2
Std nTPM: 24.1
Median nTPM: 87.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 169.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 161.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 160.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 154.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 149.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 143.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 142.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 142.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 139.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 139.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 136.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 221.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 221.2
FF:10169-103B7 60 years, female 254.2
FF:10153-102I9 76 years, female 188.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.8
Samples: 4

Max nTPM: 88.5
Min nTPM: 59.4
Sample A Female 88.5
Sample B Female 71.9
Sample C Male 71.2
Sample D Male 59.4
Entorhinal cortex
nTPM: 69.2
Samples: 4

Max nTPM: 78.7
Min nTPM: 57.4
Sample A Female 71.5
Sample B Female 69.1
Sample C Male 78.7
Sample D Male 57.4
Subiculum
nTPM: 70.7
Samples: 4

Max nTPM: 89.5
Min nTPM: 59.7
Sample A Female 89.5
Sample B Female 67.0
Sample C Male 66.7
Sample D Male 59.7
Ventral hippocampus
nTPM: 71.2
Samples: 4

Max nTPM: 90.8
Min nTPM: 55.9
Sample A Female 69.4
Sample B Female 55.9
Sample C Male 90.8
Sample D Male 68.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 129.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.6
Samples: 4

Max nTPM: 136.3
Min nTPM: 114.6
Sample A Male 133.0
Sample B Male 114.6
Sample C Female 134.3
Sample D Female 136.3
Hippocampal formation
nTPM: 128.7
Samples: 4

Max nTPM: 136.9
Min nTPM: 125.6
Sample A Male 125.6
Sample B Male 125.6
Sample C Female 136.9
Sample D Female 126.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
294052 Antisense, RP_040617_02_F11, Mouse strain C57BL/6J (56 days, male) 16.0
67936005 Antisense, RP_041018_01_F01, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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