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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1366.6 nTPM
GTEx:1366.6 nTPM
FANTOM5:2444.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001762Antibody CAB000080Antibody CAB058687
Squamous epithelial cells MediumNot detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1366.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1366.6
Samples: 156

Max nTPM: 4182.9
Min nTPM: 149.4
Std nTPM: 810.8
Median nTPM: 1211.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 4182.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 3993.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 3756.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 3461.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 3207.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 3146.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2895.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 2879.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2687.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2631.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 2536.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2512.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 2471.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 2462.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2453.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 2412.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2348.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 2334.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2327.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 2298.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2289.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 2280.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2271.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2269.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2264.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2210.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 2129.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 2101.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2074.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 2063.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1998.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1992.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1991.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1974.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1973.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1958.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1955.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1917.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1911.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1907.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1903.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1877.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1862.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1855.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1847.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1824.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1819.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1791.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1733.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1730.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1652.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1645.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1575.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1563.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1549.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1543.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1533.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1523.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1514.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1513.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1492.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1492.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1480.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1467.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1441.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1433.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1419.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1403.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1400.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1388.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1378.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 1360.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1347.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1281.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1255.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1249.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1242.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1212.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1211.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1184.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1178.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1145.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1107.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1106.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1079.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1077.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1074.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1069.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1067.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1064.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1045.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1007.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1005.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 997.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 977.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 968.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 967.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 966.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 957.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 939.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 928.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 924.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 885.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 875.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 873.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 864.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 862.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 842.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 826.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 815.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 814.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 794.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 782.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 776.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 772.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 762.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 756.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 748.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 735.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 734.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 706.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 672.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 651.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 645.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 638.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 613.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 610.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 601.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 582.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 580.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 555.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 552.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 546.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 522.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 520.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 513.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 513.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 512.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 469.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 459.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 456.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 455.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 399.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 390.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 367.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 360.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 351.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 339.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 323.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 290.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 281.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 237.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 211.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 210.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 188.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 149.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 2444.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 2444.2
FF:10204-103F6 68 years, female 2444.2

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.