HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.2 nTPM
HPA:13.2 nTPM
GTEx:7.5 nTPM
FANTOM5:8.5 Scaled Tags Per Million
Pig:3.1 nTPM
Mouse:2.4 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026294Antibody HPA053709
Glial cells MediumLow
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.6
2529 Female, age 94, left hemisphere 13.1
1855 Male, age 76, left hemisphere 12.8
1911 Female, age 85, right hemisphere 12.0
2148 Female, age 91, left hemisphere 12.0
2621 Female, age 67, right hemisphere 11.4
1898 Male, age 80, left hemisphere 8.3
Dentate gyrus
nTPM: 13.1
2530 Female, age 94, left hemisphere 22.5
2531 Female, age 67, both hemispheres 13.2
2246 Female, age 85, both hemispheres 11.5
2528 Male, age 74, both hemispheres 11.2
2010 Male, age 76, both hemispheres 11.1
1927 Female, age 91, both hemispheres 9.0
Entorhinal gyrus
nTPM: 9.7
2686 Male, age 75, right hemisphere 11.5
2117 Female, age 91, right hemisphere 11.2
1787 Male, age 76, left hemisphere 10.5
2613 Female, age 94, left hemisphere 10.1
1938 Female, age 85, left hemisphere 7.4
2764 Male, age 80, right hemisphere 7.2
Hippocampus, CA1
nTPM: 10.1
2045 Male, age 76, both hemispheres 12.1
2082 Female, age 91, right hemisphere 11.4
2527 Male, age 74, both hemispheres 11.4
1873 Female, age 85, both hemispheres 8.1
2749 Male, age 80, left hemisphere 7.3
Hippocampus, CA2
nTPM: 13.2
2437 Female, age 94, left hemisphere 20.7
1892 Male, age 76, both hemispheres 13.5
1940 Female, age 85, left hemisphere 12.1
2113 Female, age 91, right hemisphere 11.6
1963 Male, age 80, left hemisphere 10.6
2249 Male, age 74, both hemispheres 10.5
Hippocampus, CA3
nTPM: 12.6
2861 Female, age 67, both hemispheres 19.3
1891 Female, age 85, both hemispheres 14.3
1867 Male, age 76, both hemispheres 12.5
2620 Female, age 94, left hemisphere 10.9
2137 Male, age 80, left hemisphere 10.0
2436 Male, age 74, both hemispheres 8.6
Parahippocampal cortex
nTPM: 9.4
2018 Male, age 76, both hemispheres 14.6
2622 Female, age 67, right hemisphere 11.3
2245 Female, age 91, both hemispheres 9.5
2692 Male, age 74, both hemispheres 9.4
2250 Female, age 67, right hemisphere 9.3
1990 Female, age 91, right hemisphere 8.7
2693 Female, age 94, both hemispheres 8.2
1933 Female, age 85, both hemispheres 7.7
1850 Male, age 80, both hemispheres 7.6
2532 Female, age 72, left hemisphere 7.4
Perirhinal gyrus
nTPM: 7.5
1841 Female, age 85, right hemisphere 8.5
2848 Male, age 76, right hemisphere 8.1
1847 Female, age 91, left hemisphere 7.9
2521 Female, age 94, right hemisphere 7.0
1794 Male, age 80, right hemisphere 6.1
Subiculum
nTPM: 12.8
2438 Female, age 94, left hemisphere 16.3
2042 Male, age 76, both hemispheres 14.0
2729 Female, age 91, right hemisphere 12.2
1901 Male, age 80, both hemispheres 12.1
2619 Male, age 74, both hemispheres 11.3
1977 Female, age 85, both hemispheres 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.5
Samples: 197

Max nTPM: 25.4
Min nTPM: 1.5
Std nTPM: 3.9
Median nTPM: 6.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 25.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 22.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 20.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 19.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 19.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 17.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 16.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 16.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 15.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 15.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 15.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.5
FF:10153-102I9 76 years, female 15.0
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.7
Min nTPM: 1.8
Sample A Female 1.8
Sample B Female 2.2
Sample C Male 2.7
Sample D Male 2.0
Entorhinal cortex
nTPM: 3.1
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.3
Sample A Female 2.8
Sample B Female 3.2
Sample C Male 4.0
Sample D Male 2.3
Subiculum
nTPM: 2.4
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.9
Sample A Female 1.9
Sample B Female 2.1
Sample C Male 3.3
Sample D Male 2.3
Ventral hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.7
Min nTPM: 1.7
Sample A Female 1.7
Sample B Female 2.1
Sample C Male 2.7
Sample D Male 2.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.4
Min nTPM: 2.3
Sample A Male 2.4
Sample B Male 2.3
Sample C Female 2.4
Sample D Female 2.4
Hippocampal formation
nTPM: 2.0
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.6
Sample A Male 2.0
Sample B Male 2.3
Sample C Female 1.6
Sample D Female 2.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
71608225 Antisense, RP_050927_01_C09, Mouse strain C57BL/6J (56 days, male) 3.4
73520406 Antisense, RP_050927_01_C09, Mouse strain C57BL/6J (56 days, male) 0.1

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