COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:74.7 nTPM
HPA:74.7 nTPM
GTEx:51.7 nTPM
FANTOM5:137.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA063871Antibody CAB025889
Endothelial cells Not detectedNot detected
Glandular cells Not detectedLow
Peripheral nerve/ganglion Not detectedNot detected





COLON - HPA RNA-seqi
Average nTPM 74.7
overview
Male, age 54 		Colon sample 67
nTPM: 68.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 88
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 69.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 73.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 94.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 53.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 77.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 86.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 63.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 75.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 83.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 59.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 78.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 51.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 38.6
Samples: 373

Max nTPM: 111.0
Min nTPM: 23.1
Std nTPM: 10.3
Median nTPM: 36.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 111.0
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 103.1
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 88.4
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 76.5
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 67.7
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 67.7
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 65.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 65.2
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 65.2
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 59.9
GTEX-1AX9J-2526-SM-73KUY 60-69 years, male 59.7
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Colon - Transverse
Average nTPM: 51.7
Samples: 406

Max nTPM: 145.9
Min nTPM: 22.7
Std nTPM: 19.1
Median nTPM: 46.7
GTEX-1C475-1626-SM-731FP 40-49 years, female 145.9
GTEX-144GM-1226-SM-5LU52 20-29 years, male 131.3
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 125.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 111.8
GTEX-14JIY-3326-SM-6871E 60-69 years, male 109.4
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 106.9
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 105.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 104.9
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 102.0
GTEX-1LG7Z-1426-SM-CXKYV 30-39 years, male 100.5
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 94.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 137.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 137.4
FF:10014-101C5 62,83,84 years, mixed 137.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.