COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:89.1 nTPM
HPA:71.5 nTPM
GTEx:89.1 nTPM
FANTOM5:131.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA016939Antibody HPA064668
Endothelial cells LowNot detected
Glandular cells MediumLow
Peripheral nerve/ganglion MediumNot detected





COLON - HPA RNA-seqi
Average nTPM 71.5
overview
Male, age 54 		Colon sample 67
nTPM: 59.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 56.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 55.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 57.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 63
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 83.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 93.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 81.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 72.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 95.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 72.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 69.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 68.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 89.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 89.1
Samples: 373

Max nTPM: 307.1
Min nTPM: 45.2
Std nTPM: 22.1
Median nTPM: 88.2
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 307.1
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 163.8
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 157.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 153.8
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 145.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 143.8
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 134.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 133.7
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 131.6
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 124.9
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 124.8
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Colon - Transverse
Average nTPM: 85.8
Samples: 406

Max nTPM: 316.3
Min nTPM: 43.0
Std nTPM: 20.1
Median nTPM: 83.0
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 316.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 197.1
GTEX-14JIY-3326-SM-6871E 60-69 years, male 159.5
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 141.3
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 137.1
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 131.2
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 130.0
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 122.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 121.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 120.4
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 118.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 131.5
FF:10014-101C5 62,83,84 years, mixed 131.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.