HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.0 nTPM
HPA:8.0 nTPM
GTEx:68.2 nTPM
FANTOM5:76.6 Scaled Tags Per Million
Pig:55.2 nTPM
Mouse:108.9 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037065
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.0
Sample id Sample description nTPM
Hippocampus
nTPM: 6.4
1898 Male, age 80, left hemisphere 11.9
2148 Female, age 91, left hemisphere 9.2
1855 Male, age 76, left hemisphere 5.7
2621 Female, age 67, right hemisphere 5.2
1911 Female, age 85, right hemisphere 4.6
2529 Female, age 94, left hemisphere 1.8
Dentate gyrus
nTPM: 6.3
1927 Female, age 91, both hemispheres 7.7
2531 Female, age 67, both hemispheres 7.5
2246 Female, age 85, both hemispheres 6.1
2530 Female, age 94, left hemisphere 6.1
2010 Male, age 76, both hemispheres 5.5
2528 Male, age 74, both hemispheres 4.7
Entorhinal gyrus
nTPM: 3.7
2764 Male, age 80, right hemisphere 5.9
1787 Male, age 76, left hemisphere 4.1
2613 Female, age 94, left hemisphere 3.7
2117 Female, age 91, right hemisphere 3.4
1938 Female, age 85, left hemisphere 3.0
2686 Male, age 75, right hemisphere 2.4
Hippocampus, CA1
nTPM: 8.0
2749 Male, age 80, left hemisphere 17.1
1873 Female, age 85, both hemispheres 7.2
2045 Male, age 76, both hemispheres 6.0
2527 Male, age 74, both hemispheres 5.1
2082 Female, age 91, right hemisphere 4.4
Hippocampus, CA2
nTPM: 5.6
1963 Male, age 80, left hemisphere 10.8
2437 Female, age 94, left hemisphere 6.5
1892 Male, age 76, both hemispheres 5.6
2113 Female, age 91, right hemisphere 4.4
1940 Female, age 85, left hemisphere 3.3
2249 Male, age 74, both hemispheres 2.9
Hippocampus, CA3
nTPM: 6.8
2137 Male, age 80, left hemisphere 14.2
2861 Female, age 67, both hemispheres 10.5
2620 Female, age 94, left hemisphere 5.9
1867 Male, age 76, both hemispheres 4.2
1891 Female, age 85, both hemispheres 4.1
2436 Male, age 74, both hemispheres 2.0
Parahippocampal cortex
nTPM: 4.9
2622 Female, age 67, right hemisphere 7.4
2532 Female, age 72, left hemisphere 6.7
2245 Female, age 91, both hemispheres 5.7
2018 Male, age 76, both hemispheres 5.4
1850 Male, age 80, both hemispheres 5.1
2693 Female, age 94, both hemispheres 5.1
2250 Female, age 67, right hemisphere 4.3
1933 Female, age 85, both hemispheres 4.0
1990 Female, age 91, right hemisphere 3.6
2692 Male, age 74, both hemispheres 1.9
Perirhinal gyrus
nTPM: 4.9
1794 Male, age 80, right hemisphere 8.2
2521 Female, age 94, right hemisphere 4.6
2848 Male, age 76, right hemisphere 4.2
1847 Female, age 91, left hemisphere 3.9
1841 Female, age 85, right hemisphere 3.7
Subiculum
nTPM: 4.0
2729 Female, age 91, right hemisphere 6.5
1901 Male, age 80, both hemispheres 5.2
2042 Male, age 76, both hemispheres 4.8
1977 Female, age 85, both hemispheres 4.1
2619 Male, age 74, both hemispheres 1.9
2438 Female, age 94, left hemisphere 1.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.2
Samples: 197

Max nTPM: 226.1
Min nTPM: 14.3
Std nTPM: 30.3
Median nTPM: 64.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 226.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 177.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 159.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 141.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 140.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 139.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 137.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 126.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 125.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 123.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 121.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.6
FF:10169-103B7 60 years, female 109.8
FF:10153-102I9 76 years, female 43.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.5
Samples: 4

Max nTPM: 64.3
Min nTPM: 37.5
Sample A Female 64.3
Sample B Female 53.0
Sample C Male 39.0
Sample D Male 37.5
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 30.1
Min nTPM: 28.1
Sample A Female 30.1
Sample B Female 28.1
Sample C Male 29.8
Sample D Male 28.7
Subiculum
nTPM: 39.2
Samples: 4

Max nTPM: 49.6
Min nTPM: 30.3
Sample A Female 49.6
Sample B Female 34.4
Sample C Male 42.4
Sample D Male 30.3
Ventral hippocampus
nTPM: 55.3
Samples: 4

Max nTPM: 68.0
Min nTPM: 32.5
Sample A Female 60.4
Sample B Female 32.5
Sample C Male 68.0
Sample D Male 60.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.0
Samples: 4

Max nTPM: 113.5
Min nTPM: 106.3
Sample A Male 108.4
Sample B Male 113.5
Sample C Female 106.3
Sample D Female 107.6
Hippocampal formation
nTPM: 108.9
Samples: 4

Max nTPM: 118.5
Min nTPM: 104.4
Sample A Male 104.4
Sample B Male 118.5
Sample C Female 105.3
Sample D Female 107.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
2031 Antisense, RP_Baylor_102630, Mouse strain C57BL/6J (56 days, male) 11.7
2032 Antisense, RP_Baylor_102630, Mouse strain C57BL/6J (56 days, male) 8.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.