HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.8 nTPM
HPA:26.8 nTPM
GTEx:24.8 nTPM
FANTOM5:14.4 Scaled Tags Per Million
Pig:15.4 nTPM
Mouse:8.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030926Antibody HPA030927
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.3
1911 Female, age 85, right hemisphere 28.2
2148 Female, age 91, left hemisphere 27.5
1855 Male, age 76, left hemisphere 24.7
1898 Male, age 80, left hemisphere 24.3
2529 Female, age 94, left hemisphere 23.9
2621 Female, age 67, right hemisphere 23.1
Dentate gyrus
nTPM: 26.5
1927 Female, age 91, both hemispheres 29.0
2531 Female, age 67, both hemispheres 26.9
2528 Male, age 74, both hemispheres 26.5
2010 Male, age 76, both hemispheres 25.9
2246 Female, age 85, both hemispheres 25.8
2530 Female, age 94, left hemisphere 25.0
Entorhinal gyrus
nTPM: 25.0
1938 Female, age 85, left hemisphere 26.3
1787 Male, age 76, left hemisphere 25.8
2613 Female, age 94, left hemisphere 25.1
2117 Female, age 91, right hemisphere 24.9
2686 Male, age 75, right hemisphere 24.2
2764 Male, age 80, right hemisphere 23.9
Hippocampus, CA1
nTPM: 26.8
2749 Male, age 80, left hemisphere 28.5
1873 Female, age 85, both hemispheres 26.9
2527 Male, age 74, both hemispheres 26.7
2082 Female, age 91, right hemisphere 26.4
2045 Male, age 76, both hemispheres 25.3
Hippocampus, CA2
nTPM: 25.7
2113 Female, age 91, right hemisphere 28.0
1940 Female, age 85, left hemisphere 26.9
2249 Male, age 74, both hemispheres 26.5
1892 Male, age 76, both hemispheres 24.8
1963 Male, age 80, left hemisphere 24.8
2437 Female, age 94, left hemisphere 23.4
Hippocampus, CA3
nTPM: 25.0
1891 Female, age 85, both hemispheres 26.9
2137 Male, age 80, left hemisphere 26.8
2620 Female, age 94, left hemisphere 25.5
2861 Female, age 67, both hemispheres 24.0
2436 Male, age 74, both hemispheres 23.6
1867 Male, age 76, both hemispheres 23.1
Parahippocampal cortex
nTPM: 26.3
2693 Female, age 94, both hemispheres 28.3
1990 Female, age 91, right hemisphere 27.8
2245 Female, age 91, both hemispheres 27.0
2532 Female, age 72, left hemisphere 26.7
2692 Male, age 74, both hemispheres 26.7
1850 Male, age 80, both hemispheres 26.1
2250 Female, age 67, right hemisphere 26.0
2018 Male, age 76, both hemispheres 25.6
1933 Female, age 85, both hemispheres 24.5
2622 Female, age 67, right hemisphere 24.5
Perirhinal gyrus
nTPM: 26.6
2848 Male, age 76, right hemisphere 28.1
2521 Female, age 94, right hemisphere 27.5
1841 Female, age 85, right hemisphere 26.6
1847 Female, age 91, left hemisphere 26.1
1794 Male, age 80, right hemisphere 24.8
Subiculum
nTPM: 25.3
2729 Female, age 91, right hemisphere 27.0
1977 Female, age 85, both hemispheres 26.6
1901 Male, age 80, both hemispheres 25.2
2438 Female, age 94, left hemisphere 24.9
2619 Male, age 74, both hemispheres 24.5
2042 Male, age 76, both hemispheres 23.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 41.2
Min nTPM: 5.0
Std nTPM: 5.0
Median nTPM: 24.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 41.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 40.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 37.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 37.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 35.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 35.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 35.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 35.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 34.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 33.7
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 33.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.4
FF:10153-102I9 76 years, female 16.2
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.5
Sample A Female 13.9
Sample B Female 12.2
Sample C Male 13.0
Sample D Male 9.5
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 19.5
Min nTPM: 12.3
Sample A Female 15.5
Sample B Female 19.5
Sample C Male 14.4
Sample D Male 12.3
Subiculum
nTPM: 13.4
Samples: 4

Max nTPM: 18.6
Min nTPM: 10.1
Sample A Female 18.6
Sample B Female 12.6
Sample C Male 12.1
Sample D Male 10.1
Ventral hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 13.6
Min nTPM: 11.3
Sample A Female 12.1
Sample B Female 11.3
Sample C Male 13.6
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.9
Sample A Male 8.9
Sample B Male 9.1
Sample C Female 7.9
Sample D Female 8.5
Hippocampal formation
nTPM: 8.5
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.0
Sample A Male 9.5
Sample B Male 8.1
Sample C Female 8.0
Sample D Female 8.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
392927 Antisense, RP_040804_01_H09, Mouse strain C57BL/6J (56 days, male) 0.2

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