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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:69.7 nTPM
FANTOM5:177.2 Scaled Tags Per Million
Pig:97.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB010203
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 69.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 69.7
Samples: 246

Max nTPM: 122.3
Min nTPM: 34.1
Std nTPM: 17.3
Median nTPM: 68.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 122.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 113.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 112.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 111.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 110.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 108.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 107.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 105.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 104.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 103.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 101.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 101.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 101.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 98.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 98.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 98.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 98.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 98.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 98.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 97.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 97.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 96.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 96.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 94.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 94.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 94.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 93.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 93.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 92.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 91.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 90.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 90.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 89.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 89.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 89.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 88.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 88.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 88.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 88.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 87.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 87.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 86.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 86.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 85.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 85.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 84.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 84.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 84.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 84.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 83.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 83.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 82.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 82.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 82.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 82.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 81.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 81.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 81.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 80.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 80.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 80.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 80.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 79.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 79.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 79.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 79.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 79.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 78.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 78.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 78.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 78.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 78.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 77.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 77.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 76.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 76.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 76.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 76.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 76.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 75.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 75.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 75.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 75.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 75.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 74.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 74.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 73.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 73.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 73.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 72.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 72.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 72.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 72.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 72.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 71.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 71.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 70.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 70.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 70.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 70.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 70.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 70.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 70.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 69.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 69.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 69.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 69.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 68.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 68.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 68.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 68.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 68.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 67.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 66.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 66.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 66.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 66.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 66.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 65.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 65.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 65.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 65.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 65.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 65.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 64.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 64.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 64.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 64.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 63.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 63.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 63.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 63.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 63.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 62.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 62.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 61.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 61.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 61.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 61.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 61.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 61.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 60.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 60.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 60.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 60.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 60.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 60.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 60.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 60.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 60.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 59.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 58.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 58.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 58.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 58.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 58.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 57.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 56.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 56.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 56.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 56.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 55.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 55.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 55.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 55.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 55.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 55.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 55.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 55.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 54.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 54.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 54.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 53.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 53.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 53.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 52.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 52.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 52.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 52.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 52.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 51.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 51.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 50.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 50.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 49.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 49.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 48.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 48.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 48.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 47.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 47.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 47.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 46.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 46.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 45.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 45.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 45.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 44.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 44.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 43.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 43.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 42.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 42.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 41.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 40.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 38.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 38.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 36.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 34.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 177.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 177.2
FF:10164-103B2 76 years, female 177.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 97.3
Pig sample Sample description nTPM
Caudate
nTPM: 97.3
Samples: 4

Max nTPM: 107.5
Min nTPM: 88.1
Sample A Female 88.1
Sample B Female 98.8
Sample C Male 107.5
Sample D Male 94.7

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