HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.6 nTPM
HPA:28.6 nTPM
GTEx:26.2 nTPM
FANTOM5:52.2 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:87.3 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002678
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
1898 Male, age 80, left hemisphere 30.0
1855 Male, age 76, left hemisphere 26.1
2621 Female, age 67, right hemisphere 24.9
1911 Female, age 85, right hemisphere 24.4
2529 Female, age 94, left hemisphere 24.2
2148 Female, age 91, left hemisphere 22.8
Dentate gyrus
nTPM: 25.5
2010 Male, age 76, both hemispheres 28.6
1927 Female, age 91, both hemispheres 27.2
2246 Female, age 85, both hemispheres 25.7
2530 Female, age 94, left hemisphere 24.6
2528 Male, age 74, both hemispheres 23.9
2531 Female, age 67, both hemispheres 23.1
Entorhinal gyrus
nTPM: 24.0
1938 Female, age 85, left hemisphere 27.4
2764 Male, age 80, right hemisphere 25.0
1787 Male, age 76, left hemisphere 23.9
2117 Female, age 91, right hemisphere 23.3
2686 Male, age 75, right hemisphere 22.5
2613 Female, age 94, left hemisphere 22.1
Hippocampus, CA1
nTPM: 27.4
2749 Male, age 80, left hemisphere 31.6
1873 Female, age 85, both hemispheres 29.0
2527 Male, age 74, both hemispheres 26.8
2045 Male, age 76, both hemispheres 25.4
2082 Female, age 91, right hemisphere 24.0
Hippocampus, CA2
nTPM: 26.5
1892 Male, age 76, both hemispheres 31.2
1963 Male, age 80, left hemisphere 27.8
2249 Male, age 74, both hemispheres 26.9
1940 Female, age 85, left hemisphere 25.1
2437 Female, age 94, left hemisphere 24.3
2113 Female, age 91, right hemisphere 23.7
Hippocampus, CA3
nTPM: 25.7
1867 Male, age 76, both hemispheres 29.5
2137 Male, age 80, left hemisphere 28.4
2436 Male, age 74, both hemispheres 26.1
1891 Female, age 85, both hemispheres 25.5
2620 Female, age 94, left hemisphere 23.8
2861 Female, age 67, both hemispheres 20.7
Parahippocampal cortex
nTPM: 25.6
1850 Male, age 80, both hemispheres 31.1
1933 Female, age 85, both hemispheres 26.6
1990 Female, age 91, right hemisphere 26.6
2250 Female, age 67, right hemisphere 25.9
2018 Male, age 76, both hemispheres 25.4
2245 Female, age 91, both hemispheres 25.3
2692 Male, age 74, both hemispheres 25.0
2693 Female, age 94, both hemispheres 25.0
2532 Female, age 72, left hemisphere 23.9
2622 Female, age 67, right hemisphere 21.4
Perirhinal gyrus
nTPM: 28.6
1841 Female, age 85, right hemisphere 31.9
1847 Female, age 91, left hemisphere 29.3
1794 Male, age 80, right hemisphere 28.5
2848 Male, age 76, right hemisphere 27.2
2521 Female, age 94, right hemisphere 26.4
Subiculum
nTPM: 25.5
1901 Male, age 80, both hemispheres 27.5
1977 Female, age 85, both hemispheres 27.2
2438 Female, age 94, left hemisphere 25.1
2042 Male, age 76, both hemispheres 24.7
2619 Male, age 74, both hemispheres 24.6
2729 Female, age 91, right hemisphere 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 45.8
Min nTPM: 13.3
Std nTPM: 5.5
Median nTPM: 25.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 42.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 39.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 39.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 39.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 38.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 38.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 38.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 36.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 35.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 35.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.2
FF:10153-102I9 76 years, female 57.4
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.7
Sample A Female 23.5
Sample B Female 19.9
Sample C Male 21.5
Sample D Male 16.7
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.2
Min nTPM: 18.1
Sample A Female 21.2
Sample B Female 22.2
Sample C Male 20.1
Sample D Male 18.1
Subiculum
nTPM: 19.8
Samples: 4

Max nTPM: 24.0
Min nTPM: 18.0
Sample A Female 24.0
Sample B Female 18.0
Sample C Male 18.7
Sample D Male 18.3
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 21.5
Min nTPM: 16.7
Sample A Female 21.5
Sample B Female 16.7
Sample C Male 18.2
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.3
Samples: 4

Max nTPM: 83.1
Min nTPM: 78.0
Sample A Male 82.3
Sample B Male 83.1
Sample C Female 78.0
Sample D Female 81.9
Hippocampal formation
nTPM: 87.4
Samples: 4

Max nTPM: 92.0
Min nTPM: 78.5
Sample A Male 87.6
Sample B Male 91.3
Sample C Female 92.0
Sample D Female 78.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
75774648 Antisense, RP_060601_01_A05, Mouse strain C57BL/6J (56 days, male) 13.2

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