HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.0 nTPM
HPA:31.0 nTPM
GTEx:33.7 nTPM
FANTOM5:20.3 Scaled Tags Per Million
Pig:52.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030449
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 28.0
1855 Male, age 76, left hemisphere 30.2
1898 Male, age 80, left hemisphere 29.2
2621 Female, age 67, right hemisphere 28.1
2148 Female, age 91, left hemisphere 27.7
1911 Female, age 85, right hemisphere 27.5
2529 Female, age 94, left hemisphere 25.2
Dentate gyrus
nTPM: 29.0
1927 Female, age 91, both hemispheres 31.5
2010 Male, age 76, both hemispheres 29.8
2246 Female, age 85, both hemispheres 29.5
2530 Female, age 94, left hemisphere 28.7
2528 Male, age 74, both hemispheres 27.4
2531 Female, age 67, both hemispheres 27.3
Entorhinal gyrus
nTPM: 28.6
1938 Female, age 85, left hemisphere 30.9
2613 Female, age 94, left hemisphere 28.9
2764 Male, age 80, right hemisphere 28.6
2686 Male, age 75, right hemisphere 28.5
1787 Male, age 76, left hemisphere 28.1
2117 Female, age 91, right hemisphere 26.5
Hippocampus, CA1
nTPM: 31.0
2749 Male, age 80, left hemisphere 36.1
1873 Female, age 85, both hemispheres 31.2
2045 Male, age 76, both hemispheres 30.2
2527 Male, age 74, both hemispheres 30.2
2082 Female, age 91, right hemisphere 27.3
Hippocampus, CA2
nTPM: 28.2
1892 Male, age 76, both hemispheres 31.2
2437 Female, age 94, left hemisphere 28.9
1963 Male, age 80, left hemisphere 28.2
1940 Female, age 85, left hemisphere 27.7
2249 Male, age 74, both hemispheres 26.8
2113 Female, age 91, right hemisphere 26.7
Hippocampus, CA3
nTPM: 29.6
2137 Male, age 80, left hemisphere 31.7
1867 Male, age 76, both hemispheres 31.6
2620 Female, age 94, left hemisphere 30.5
2861 Female, age 67, both hemispheres 28.2
1891 Female, age 85, both hemispheres 27.9
2436 Male, age 74, both hemispheres 27.9
Parahippocampal cortex
nTPM: 28.4
1933 Female, age 85, both hemispheres 30.8
2532 Female, age 72, left hemisphere 29.1
2250 Female, age 67, right hemisphere 28.9
2622 Female, age 67, right hemisphere 28.8
1850 Male, age 80, both hemispheres 28.7
2245 Female, age 91, both hemispheres 28.2
2693 Female, age 94, both hemispheres 28.0
2018 Male, age 76, both hemispheres 27.2
1990 Female, age 91, right hemisphere 27.1
2692 Male, age 74, both hemispheres 26.9
Perirhinal gyrus
nTPM: 29.4
1847 Female, age 91, left hemisphere 30.8
1794 Male, age 80, right hemisphere 30.4
1841 Female, age 85, right hemisphere 30.0
2521 Female, age 94, right hemisphere 28.1
2848 Male, age 76, right hemisphere 27.4
Subiculum
nTPM: 27.0
2042 Male, age 76, both hemispheres 30.1
1977 Female, age 85, both hemispheres 28.7
2619 Male, age 74, both hemispheres 26.7
1901 Male, age 80, both hemispheres 26.3
2729 Female, age 91, right hemisphere 26.2
2438 Female, age 94, left hemisphere 23.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.7
Samples: 197

Max nTPM: 79.1
Min nTPM: 14.1
Std nTPM: 10.7
Median nTPM: 32.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 66.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 63.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 61.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 59.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 59.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 58.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 58.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 56.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 55.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 52.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.3
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.4
Samples: 4

Max nTPM: 73.2
Min nTPM: 41.8
Sample A Female 73.2
Sample B Female 52.2
Sample C Male 42.4
Sample D Male 41.8
Entorhinal cortex
nTPM: 42.8
Samples: 4

Max nTPM: 55.6
Min nTPM: 29.9
Sample A Female 43.3
Sample B Female 55.6
Sample C Male 42.5
Sample D Male 29.9
Subiculum
nTPM: 44.4
Samples: 4

Max nTPM: 59.8
Min nTPM: 36.3
Sample A Female 59.8
Sample B Female 40.4
Sample C Male 36.3
Sample D Male 40.9
Ventral hippocampus
nTPM: 43.9
Samples: 4

Max nTPM: 49.8
Min nTPM: 37.0
Sample A Female 49.8
Sample B Female 37.0
Sample C Male 40.9
Sample D Male 47.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.