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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:174.8 nTPM
GTEx:174.8 nTPM
FANTOM5:11.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018843Antibody HPA019080Antibody HPA019092
Squamous epithelial cells LowNot detectedNot detected



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 174.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 174.8
Samples: 156

Max nTPM: 535.1
Min nTPM: 22.8
Std nTPM: 98.3
Median nTPM: 172.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 535.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 487.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 459.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 448.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 395.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 364.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 360.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 342.7
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 327.9
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 312.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 309.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 304.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 303.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 299.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 298.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 293.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 292.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 287.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 279.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 279.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 278.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 276.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 275.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 273.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 264.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 261.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 257.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 256.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 254.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 254.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 248.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 248.6
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 247.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 243.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 241.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 241.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 240.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 234.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 231.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 231.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 226.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 225.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 225.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 223.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 223.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 221.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 220.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 219.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 218.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 214.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 213.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 213.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 211.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 210.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 207.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 207.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 206.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 202.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 202.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 202.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 201.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 201.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 199.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 198.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 198.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 196.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 192.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 191.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 190.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 188.2
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 186.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 184.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 182.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 180.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 176.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 176.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 173.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 172.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 172.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 169.4
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 165.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 164.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 163.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 163.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 163.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 162.5
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 161.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 158.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 157.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 156.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 151.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 150.2
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 147.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 147.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 144.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 135.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 133.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 132.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 131.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 130.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 125.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 124.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 121.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 120.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 113.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 112.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 111.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 109.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 106.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 105.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 104.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 104.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 101.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 99.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 99.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 95.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 94.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 94.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 94.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 93.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 85.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 84.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 84.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 83.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 81.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 80.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 78.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 74.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 72.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 71.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 68.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 67.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 66.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 62.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 60.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 58.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 57.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 57.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 55.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 54.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 52.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 52.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 48.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 46.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 45.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 44.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 43.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 43.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 43.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 41.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 39.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 36.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 23.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 23.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 22.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 22.8
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 11.1
FF:10204-103F6 68 years, female 11.1

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