HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:90.2 nTPM
HPA:90.2 nTPM
GTEx:69.6 nTPM
FANTOM5:192.3 Scaled Tags Per Million
Pig:93.8 nTPM
Mouse:207.1 nTPM
Allen mouse:19.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038845Antibody HPA038846Antibody CAB005221
Glial cells MediumNot detectedLow
Neuronal cells HighHighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.2
Sample id Sample description nTPM
Hippocampus
nTPM: 82.4
1898 Male, age 80, left hemisphere 94.0
2529 Female, age 94, left hemisphere 90.8
2621 Female, age 67, right hemisphere 82.7
2148 Female, age 91, left hemisphere 79.1
1911 Female, age 85, right hemisphere 75.5
1855 Male, age 76, left hemisphere 72.1
Dentate gyrus
nTPM: 81.6
2010 Male, age 76, both hemispheres 106.9
2528 Male, age 74, both hemispheres 81.1
1927 Female, age 91, both hemispheres 79.0
2246 Female, age 85, both hemispheres 77.9
2530 Female, age 94, left hemisphere 75.8
2531 Female, age 67, both hemispheres 68.7
Entorhinal gyrus
nTPM: 73.2
1938 Female, age 85, left hemisphere 88.0
2117 Female, age 91, right hemisphere 85.2
1787 Male, age 76, left hemisphere 78.2
2764 Male, age 80, right hemisphere 71.4
2613 Female, age 94, left hemisphere 58.8
2686 Male, age 75, right hemisphere 57.7
Hippocampus, CA1
nTPM: 90.2
2527 Male, age 74, both hemispheres 109.4
2045 Male, age 76, both hemispheres 95.8
1873 Female, age 85, both hemispheres 86.5
2749 Male, age 80, left hemisphere 83.5
2082 Female, age 91, right hemisphere 75.7
Hippocampus, CA2
nTPM: 86.8
2249 Male, age 74, both hemispheres 140.9
1963 Male, age 80, left hemisphere 80.4
1892 Male, age 76, both hemispheres 79.5
1940 Female, age 85, left hemisphere 75.3
2113 Female, age 91, right hemisphere 75.2
2437 Female, age 94, left hemisphere 69.8
Hippocampus, CA3
nTPM: 85.0
2436 Male, age 74, both hemispheres 126.8
1867 Male, age 76, both hemispheres 93.7
2620 Female, age 94, left hemisphere 77.6
1891 Female, age 85, both hemispheres 77.5
2137 Male, age 80, left hemisphere 70.7
2861 Female, age 67, both hemispheres 64.0
Parahippocampal cortex
nTPM: 73.5
2018 Male, age 76, both hemispheres 94.4
2250 Female, age 67, right hemisphere 84.8
1933 Female, age 85, both hemispheres 84.1
1990 Female, age 91, right hemisphere 78.5
2245 Female, age 91, both hemispheres 76.9
1850 Male, age 80, both hemispheres 73.3
2532 Female, age 72, left hemisphere 71.9
2693 Female, age 94, both hemispheres 62.8
2622 Female, age 67, right hemisphere 58.9
2692 Male, age 74, both hemispheres 49.7
Perirhinal gyrus
nTPM: 78.4
1841 Female, age 85, right hemisphere 89.0
1847 Female, age 91, left hemisphere 84.8
2521 Female, age 94, right hemisphere 79.7
1794 Male, age 80, right hemisphere 71.8
2848 Male, age 76, right hemisphere 66.7
Subiculum
nTPM: 79.7
2042 Male, age 76, both hemispheres 100.2
1977 Female, age 85, both hemispheres 85.2
1901 Male, age 80, both hemispheres 75.7
2729 Female, age 91, right hemisphere 74.8
2438 Female, age 94, left hemisphere 73.7
2619 Male, age 74, both hemispheres 68.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.6
Samples: 197

Max nTPM: 387.5
Min nTPM: 25.8
Std nTPM: 41.9
Median nTPM: 58.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 387.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 306.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 199.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 195.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 186.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 183.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 178.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 176.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 153.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 137.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 132.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 192.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 192.3
FF:10153-102I9 76 years, female 270.6
FF:10169-103B7 60 years, female 114.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 93.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 93.4
Samples: 4

Max nTPM: 115.8
Min nTPM: 84.0
Sample A Female 115.8
Sample B Female 88.9
Sample C Male 84.8
Sample D Male 84.0
Entorhinal cortex
nTPM: 93.8
Samples: 4

Max nTPM: 106.4
Min nTPM: 83.1
Sample A Female 99.0
Sample B Female 106.4
Sample C Male 86.5
Sample D Male 83.1
Subiculum
nTPM: 92.5
Samples: 4

Max nTPM: 120.0
Min nTPM: 78.5
Sample A Female 120.0
Sample B Female 84.8
Sample C Male 78.5
Sample D Male 86.7
Ventral hippocampus
nTPM: 87.6
Samples: 4

Max nTPM: 96.3
Min nTPM: 67.0
Sample A Female 93.4
Sample B Female 67.0
Sample C Male 93.5
Sample D Male 96.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 207.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 207.1
Samples: 4

Max nTPM: 237.1
Min nTPM: 163.8
Sample A Male 163.8
Sample B Male 192.0
Sample C Female 235.6
Sample D Female 237.1
Hippocampal formation
nTPM: 206.9
Samples: 4

Max nTPM: 253.5
Min nTPM: 170.9
Sample A Male 170.9
Sample B Male 171.4
Sample C Female 231.7
Sample D Female 253.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.2
69735138 Antisense, RP_050503_02_B08, Mouse strain C57BL/6J (56 days, male) 19.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.