HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.8 nTPM
HPA:42.8 nTPM
GTEx:25.3 nTPM
FANTOM5:34.6 Scaled Tags Per Million
Pig:43.2 nTPM
Mouse:41.6 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028053Antibody HPA029615Antibody HPA029616
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.8
Sample id Sample description nTPM
Hippocampus
nTPM: 38.5
1898 Male, age 80, left hemisphere 49.8
1855 Male, age 76, left hemisphere 44.6
2529 Female, age 94, left hemisphere 36.4
2148 Female, age 91, left hemisphere 34.3
2621 Female, age 67, right hemisphere 34.1
1911 Female, age 85, right hemisphere 31.9
Dentate gyrus
nTPM: 36.1
2010 Male, age 76, both hemispheres 40.8
2246 Female, age 85, both hemispheres 38.6
2530 Female, age 94, left hemisphere 37.0
2528 Male, age 74, both hemispheres 35.6
2531 Female, age 67, both hemispheres 33.5
1927 Female, age 91, both hemispheres 31.1
Entorhinal gyrus
nTPM: 36.5
1787 Male, age 76, left hemisphere 40.4
2686 Male, age 75, right hemisphere 37.5
2764 Male, age 80, right hemisphere 36.4
1938 Female, age 85, left hemisphere 35.4
2613 Female, age 94, left hemisphere 35.2
2117 Female, age 91, right hemisphere 34.0
Hippocampus, CA1
nTPM: 35.3
2082 Female, age 91, right hemisphere 36.8
1873 Female, age 85, both hemispheres 36.5
2527 Male, age 74, both hemispheres 35.4
2749 Male, age 80, left hemisphere 34.4
2045 Male, age 76, both hemispheres 33.4
Hippocampus, CA2
nTPM: 36.5
1940 Female, age 85, left hemisphere 42.9
2437 Female, age 94, left hemisphere 38.3
2113 Female, age 91, right hemisphere 37.3
2249 Male, age 74, both hemispheres 34.4
1963 Male, age 80, left hemisphere 34.0
1892 Male, age 76, both hemispheres 31.9
Hippocampus, CA3
nTPM: 33.5
2861 Female, age 67, both hemispheres 35.1
1891 Female, age 85, both hemispheres 34.0
2436 Male, age 74, both hemispheres 33.9
2137 Male, age 80, left hemisphere 33.2
2620 Female, age 94, left hemisphere 32.7
1867 Male, age 76, both hemispheres 32.2
Parahippocampal cortex
nTPM: 36.6
1850 Male, age 80, both hemispheres 38.1
2622 Female, age 67, right hemisphere 37.6
2693 Female, age 94, both hemispheres 37.2
2245 Female, age 91, both hemispheres 37.1
2250 Female, age 67, right hemisphere 37.1
1933 Female, age 85, both hemispheres 36.6
2692 Male, age 74, both hemispheres 36.0
2532 Female, age 72, left hemisphere 35.8
1990 Female, age 91, right hemisphere 35.5
2018 Male, age 76, both hemispheres 35.2
Perirhinal gyrus
nTPM: 42.8
2521 Female, age 94, right hemisphere 48.1
1794 Male, age 80, right hemisphere 46.3
1847 Female, age 91, left hemisphere 44.3
1841 Female, age 85, right hemisphere 40.9
2848 Male, age 76, right hemisphere 34.5
Subiculum
nTPM: 34.9
2438 Female, age 94, left hemisphere 37.8
2619 Male, age 74, both hemispheres 35.7
1977 Female, age 85, both hemispheres 35.6
2729 Female, age 91, right hemisphere 34.4
2042 Male, age 76, both hemispheres 33.6
1901 Male, age 80, both hemispheres 32.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.3
Samples: 197

Max nTPM: 107.0
Min nTPM: 12.8
Std nTPM: 11.0
Median nTPM: 22.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 107.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 77.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 52.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 51.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 50.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 48.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 46.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 46.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 46.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.6
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 25.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.3
Samples: 4

Max nTPM: 56.2
Min nTPM: 20.5
Sample A Female 56.2
Sample B Female 42.3
Sample C Male 42.2
Sample D Male 20.5
Entorhinal cortex
nTPM: 43.2
Samples: 4

Max nTPM: 53.6
Min nTPM: 31.8
Sample A Female 42.2
Sample B Female 45.1
Sample C Male 53.6
Sample D Male 31.8
Subiculum
nTPM: 39.3
Samples: 4

Max nTPM: 59.1
Min nTPM: 27.5
Sample A Female 59.1
Sample B Female 34.3
Sample C Male 36.2
Sample D Male 27.5
Ventral hippocampus
nTPM: 33.3
Samples: 4

Max nTPM: 49.2
Min nTPM: 24.9
Sample A Female 24.9
Sample B Female 28.2
Sample C Male 30.7
Sample D Male 49.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 47.8
Min nTPM: 31.7
Sample A Male 47.8
Sample B Male 36.7
Sample C Female 37.8
Sample D Female 31.7
Hippocampal formation
nTPM: 41.6
Samples: 4

Max nTPM: 47.0
Min nTPM: 38.3
Sample A Male 38.3
Sample B Male 47.0
Sample C Female 38.4
Sample D Female 42.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
75651202 Antisense, RP_060518_01_C10, Mouse strain C57BL/6J (56 days, male) 6.2
79588292 Antisense, RP_071204_02_E03, Mouse strain C57BL/6J (56 days, male) 5.9
68666481 Antisense, RP_050126_02_D02, Mouse strain C57BL/6J (56 days, male) 5.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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