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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:231.4 nTPM
FANTOM5:344.0 Scaled Tags Per Million
Pig:35.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA038149Antibody HPA038150
Glial cells HighMedium
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 231.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 231.4
Samples: 246

Max nTPM: 830.0
Min nTPM: 95.0
Std nTPM: 103.1
Median nTPM: 206.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 830.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 704.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 593.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 534.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 525.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 515.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 504.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 487.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 478.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 478.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 476.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 442.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 432.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 428.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 427.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 424.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 423.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 414.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 408.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 404.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 395.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 387.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 371.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 358.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 357.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 348.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 343.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 338.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 334.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 333.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 330.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 327.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 327.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 326.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 325.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 320.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 313.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 312.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 308.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 306.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 305.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 301.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 294.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 294.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 294.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 289.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 286.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 286.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 285.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 285.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 282.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 282.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 280.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 278.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 277.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 277.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 274.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 272.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 271.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 270.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 270.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 266.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 265.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 263.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 258.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 258.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 255.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 255.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 251.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 251.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 250.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 249.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 248.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 243.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 243.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 243.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 243.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 242.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 241.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 241.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 241.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 238.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 237.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 237.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 236.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 236.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 235.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 235.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 234.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 233.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 233.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 231.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 230.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 229.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 228.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 227.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 227.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 226.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 226.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 225.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 225.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 224.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 224.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 221.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 221.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 220.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 218.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 215.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 215.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 215.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 215.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 213.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 213.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 212.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 211.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 211.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 210.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 210.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 209.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 208.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 207.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 207.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 206.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 206.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 206.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 205.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 205.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 204.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 202.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 202.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 201.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 198.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 198.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 198.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 197.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 196.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 196.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 196.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 195.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 195.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 194.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 193.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 191.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 191.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 191.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 187.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 187.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 184.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 183.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 180.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 179.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 178.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 178.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 177.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 176.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 176.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 174.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 174.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 173.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 173.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 172.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 171.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 171.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 170.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 170.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 170.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 169.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 169.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 169.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 169.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 167.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 166.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 165.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 165.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 165.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 164.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 164.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 163.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 163.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 163.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 163.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 162.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 162.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 161.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 161.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 160.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 160.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 158.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 158.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 157.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 157.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 156.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 155.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 154.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 154.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 153.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 152.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 151.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 151.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 151.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 151.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 151.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 151.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 150.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 148.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 146.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 146.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 146.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 145.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 144.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 144.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 142.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 142.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 141.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 140.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 140.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 140.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 139.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 139.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 138.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 137.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 137.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 137.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 136.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 135.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 135.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 131.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 131.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 129.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 129.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 128.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 128.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 128.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 128.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 126.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 126.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 122.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 120.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 115.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 112.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 110.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 110.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 95.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 344.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 344.0
FF:10164-103B2 76 years, female 344.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 35.4
Pig sample Sample description nTPM
Caudate
nTPM: 35.4
Samples: 4

Max nTPM: 39.4
Min nTPM: 33.1
Sample A Female 33.1
Sample B Female 35.0
Sample C Male 39.4
Sample D Male 34.0

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