HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:5.5 nTPM
HPA:5.5 nTPM
GTEx:6.2 nTPM
FANTOM5:40.6 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:24.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028926
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.5
Sample id Sample description nTPM
Hippocampus
nTPM: 1.9
2621 Female, age 67, right hemisphere 3.6
1855 Male, age 76, left hemisphere 3.5
1898 Male, age 80, left hemisphere 1.8
2529 Female, age 94, left hemisphere 1.0
1911 Female, age 85, right hemisphere 0.9
2148 Female, age 91, left hemisphere 0.4
Dentate gyrus
nTPM: 2.2
2531 Female, age 67, both hemispheres 9.8
2246 Female, age 85, both hemispheres 2.3
2010 Male, age 76, both hemispheres 1.3
1927 Female, age 91, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 2.3
1787 Male, age 76, left hemisphere 6.9
2613 Female, age 94, left hemisphere 2.9
2764 Male, age 80, right hemisphere 2.3
2117 Female, age 91, right hemisphere 1.2
2686 Male, age 75, right hemisphere 0.8
1938 Female, age 85, left hemisphere 0.0
Hippocampus, CA1
nTPM: 4.0
2045 Male, age 76, both hemispheres 19.7
1873 Female, age 85, both hemispheres 0.2
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 1.3
2437 Female, age 94, left hemisphere 4.8
1892 Male, age 76, both hemispheres 3.1
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 5.5
2436 Male, age 74, both hemispheres 14.4
1891 Female, age 85, both hemispheres 5.7
2620 Female, age 94, left hemisphere 4.8
1867 Male, age 76, both hemispheres 4.0
2861 Female, age 67, both hemispheres 3.9
2137 Male, age 80, left hemisphere 0.0
Parahippocampal cortex
nTPM: 3.8
2693 Female, age 94, both hemispheres 10.8
2250 Female, age 67, right hemisphere 7.9
2532 Female, age 72, left hemisphere 4.7
2245 Female, age 91, both hemispheres 3.6
2018 Male, age 76, both hemispheres 3.3
1850 Male, age 80, both hemispheres 2.2
1933 Female, age 85, both hemispheres 2.1
1990 Female, age 91, right hemisphere 2.1
2622 Female, age 67, right hemisphere 1.4
2692 Male, age 74, both hemispheres 0.2
Perirhinal gyrus
nTPM: 5.0
2521 Female, age 94, right hemisphere 7.7
2848 Male, age 76, right hemisphere 7.5
1841 Female, age 85, right hemisphere 4.5
1794 Male, age 80, right hemisphere 3.6
1847 Female, age 91, left hemisphere 1.4
Subiculum
nTPM: 2.3
2438 Female, age 94, left hemisphere 4.6
1977 Female, age 85, both hemispheres 4.2
2619 Male, age 74, both hemispheres 2.7
1901 Male, age 80, both hemispheres 1.6
2729 Female, age 91, right hemisphere 0.5
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.2
Samples: 197

Max nTPM: 14.4
Min nTPM: 2.0
Std nTPM: 2.4
Median nTPM: 5.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 13.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 13.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 13.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 12.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 11.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 11.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 11.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 11.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 10.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 10.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.6
FF:10153-102I9 76 years, female 46.8
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 25.0
Min nTPM: 12.9
Sample A Female 15.1
Sample B Female 12.9
Sample C Male 25.0
Sample D Male 13.5
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 28.3
Min nTPM: 20.9
Sample A Female 23.1
Sample B Female 20.9
Sample C Male 28.3
Sample D Male 22.8
Subiculum
nTPM: 24.2
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.1
Sample A Female 29.2
Sample B Female 21.2
Sample C Male 25.3
Sample D Male 21.1
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 20.6
Min nTPM: 14.7
Sample A Female 17.0
Sample B Female 16.0
Sample C Male 20.6
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 27.9
Min nTPM: 22.1
Sample A Male 22.8
Sample B Male 25.8
Sample C Female 22.1
Sample D Female 27.9
Hippocampal formation
nTPM: 18.9
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.3
Sample A Male 22.2
Sample B Male 18.9
Sample C Female 16.3
Sample D Female 18.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
73497168 Antisense, RP_051121_01_A11, Mouse strain C57BL/6J (56 days, male) 1.0
71488931 Antisense, RP_050825_03_C10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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