HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:85.4 nTPM
HPA:85.4 nTPM
GTEx:64.1 nTPM
FANTOM5:159.0 Scaled Tags Per Million
Pig:66.8 nTPM
Mouse:129.9 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.4
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
1898 Male, age 80, left hemisphere 61.9
2148 Female, age 91, left hemisphere 59.6
2529 Female, age 94, left hemisphere 53.3
1911 Female, age 85, right hemisphere 52.7
1855 Male, age 76, left hemisphere 52.2
2621 Female, age 67, right hemisphere 49.5
Dentate gyrus
nTPM: 56.3
1927 Female, age 91, both hemispheres 78.1
2246 Female, age 85, both hemispheres 65.1
2531 Female, age 67, both hemispheres 53.0
2528 Male, age 74, both hemispheres 51.1
2010 Male, age 76, both hemispheres 48.9
2530 Female, age 94, left hemisphere 41.4
Entorhinal gyrus
nTPM: 79.2
1938 Female, age 85, left hemisphere 110.8
2613 Female, age 94, left hemisphere 95.0
1787 Male, age 76, left hemisphere 86.9
2764 Male, age 80, right hemisphere 78.1
2686 Male, age 75, right hemisphere 54.4
2117 Female, age 91, right hemisphere 49.8
Hippocampus, CA1
nTPM: 61.3
2749 Male, age 80, left hemisphere 73.5
1873 Female, age 85, both hemispheres 63.0
2082 Female, age 91, right hemisphere 59.9
2527 Male, age 74, both hemispheres 56.3
2045 Male, age 76, both hemispheres 54.0
Hippocampus, CA2
nTPM: 63.9
1892 Male, age 76, both hemispheres 94.8
1940 Female, age 85, left hemisphere 64.4
1963 Male, age 80, left hemisphere 62.7
2113 Female, age 91, right hemisphere 58.4
2249 Male, age 74, both hemispheres 51.6
2437 Female, age 94, left hemisphere 51.3
Hippocampus, CA3
nTPM: 60.3
1867 Male, age 76, both hemispheres 76.8
1891 Female, age 85, both hemispheres 66.9
2137 Male, age 80, left hemisphere 62.3
2620 Female, age 94, left hemisphere 56.3
2861 Female, age 67, both hemispheres 52.8
2436 Male, age 74, both hemispheres 46.8
Parahippocampal cortex
nTPM: 66.1
1850 Male, age 80, both hemispheres 106.3
1990 Female, age 91, right hemisphere 87.4
1933 Female, age 85, both hemispheres 72.9
2692 Male, age 74, both hemispheres 64.0
2622 Female, age 67, right hemisphere 57.9
2532 Female, age 72, left hemisphere 56.8
2693 Female, age 94, both hemispheres 56.0
2250 Female, age 67, right hemisphere 53.6
2245 Female, age 91, both hemispheres 53.2
2018 Male, age 76, both hemispheres 52.6
Perirhinal gyrus
nTPM: 85.4
1847 Female, age 91, left hemisphere 115.4
1794 Male, age 80, right hemisphere 89.2
1841 Female, age 85, right hemisphere 88.8
2848 Male, age 76, right hemisphere 71.8
2521 Female, age 94, right hemisphere 61.8
Subiculum
nTPM: 58.6
1977 Female, age 85, both hemispheres 73.3
1901 Male, age 80, both hemispheres 62.6
2438 Female, age 94, left hemisphere 62.4
2619 Male, age 74, both hemispheres 54.7
2729 Female, age 91, right hemisphere 51.8
2042 Male, age 76, both hemispheres 46.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.1
Samples: 197

Max nTPM: 172.6
Min nTPM: 11.7
Std nTPM: 32.5
Median nTPM: 59.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 172.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 161.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 152.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 137.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 137.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 137.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 136.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 134.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 134.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 133.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 129.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 159.0
FF:10153-102I9 76 years, female 161.0
FF:10169-103B7 60 years, female 156.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 66.9
Samples: 4

Max nTPM: 84.3
Min nTPM: 50.3
Sample A Female 84.3
Sample B Female 76.8
Sample C Male 50.3
Sample D Male 56.0
Entorhinal cortex
nTPM: 40.0
Samples: 4

Max nTPM: 51.6
Min nTPM: 30.4
Sample A Female 38.9
Sample B Female 51.6
Sample C Male 38.9
Sample D Male 30.4
Subiculum
nTPM: 46.8
Samples: 4

Max nTPM: 52.6
Min nTPM: 41.2
Sample A Female 52.6
Sample B Female 45.9
Sample C Male 47.4
Sample D Male 41.2
Ventral hippocampus
nTPM: 49.9
Samples: 4

Max nTPM: 58.8
Min nTPM: 41.2
Sample A Female 49.6
Sample B Female 41.2
Sample C Male 50.1
Sample D Male 58.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 129.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.5
Samples: 4

Max nTPM: 96.0
Min nTPM: 58.4
Sample A Male 74.2
Sample B Male 58.4
Sample C Female 96.0
Sample D Female 77.2
Hippocampal formation
nTPM: 129.9
Samples: 4

Max nTPM: 144.9
Min nTPM: 110.7
Sample A Male 126.9
Sample B Male 144.9
Sample C Female 137.0
Sample D Female 110.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
71281865 Antisense, RP_050818_02_H04, Mouse strain C57BL/6J (56 days, male) 9.7
73616037 Antisense, RP_050818_02_H04, Mouse strain C57BL/6J (56 days, male) 7.4

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