HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.3 nTPM
HPA:32.3 nTPM
GTEx:22.5 nTPM
FANTOM5:52.5 Scaled Tags Per Million
Pig:63.3 nTPM
Mouse:48.2 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024618
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 23.6
2621 Female, age 67, right hemisphere 26.1
2529 Female, age 94, left hemisphere 24.5
2148 Female, age 91, left hemisphere 24.3
1911 Female, age 85, right hemisphere 23.2
1855 Male, age 76, left hemisphere 23.0
1898 Male, age 80, left hemisphere 20.4
Dentate gyrus
nTPM: 23.0
1927 Female, age 91, both hemispheres 37.8
2531 Female, age 67, both hemispheres 28.1
2010 Male, age 76, both hemispheres 25.0
2528 Male, age 74, both hemispheres 16.8
2530 Female, age 94, left hemisphere 15.8
2246 Female, age 85, both hemispheres 14.7
Entorhinal gyrus
nTPM: 17.9
1787 Male, age 76, left hemisphere 23.3
2764 Male, age 80, right hemisphere 21.5
2613 Female, age 94, left hemisphere 19.0
1938 Female, age 85, left hemisphere 18.7
2686 Male, age 75, right hemisphere 13.0
2117 Female, age 91, right hemisphere 12.0
Hippocampus, CA1
nTPM: 32.3
2749 Male, age 80, left hemisphere 68.5
2045 Male, age 76, both hemispheres 36.9
2527 Male, age 74, both hemispheres 22.3
1873 Female, age 85, both hemispheres 18.6
2082 Female, age 91, right hemisphere 15.0
Hippocampus, CA2
nTPM: 21.9
1892 Male, age 76, both hemispheres 33.8
1963 Male, age 80, left hemisphere 28.7
2249 Male, age 74, both hemispheres 17.8
2437 Female, age 94, left hemisphere 17.6
1940 Female, age 85, left hemisphere 16.8
2113 Female, age 91, right hemisphere 16.7
Hippocampus, CA3
nTPM: 32.3
2137 Male, age 80, left hemisphere 74.5
1867 Male, age 76, both hemispheres 36.0
2861 Female, age 67, both hemispheres 26.9
2620 Female, age 94, left hemisphere 25.8
1891 Female, age 85, both hemispheres 16.4
2436 Male, age 74, both hemispheres 14.3
Parahippocampal cortex
nTPM: 20.6
2245 Female, age 91, both hemispheres 27.7
2250 Female, age 67, right hemisphere 24.0
2018 Male, age 76, both hemispheres 23.1
1850 Male, age 80, both hemispheres 22.8
1990 Female, age 91, right hemisphere 20.8
2532 Female, age 72, left hemisphere 19.3
2622 Female, age 67, right hemisphere 18.5
2693 Female, age 94, both hemispheres 18.3
1933 Female, age 85, both hemispheres 17.2
2692 Male, age 74, both hemispheres 14.8
Perirhinal gyrus
nTPM: 24.0
1794 Male, age 80, right hemisphere 27.5
1847 Female, age 91, left hemisphere 24.8
1841 Female, age 85, right hemisphere 23.8
2848 Male, age 76, right hemisphere 23.6
2521 Female, age 94, right hemisphere 20.4
Subiculum
nTPM: 20.4
1901 Male, age 80, both hemispheres 32.2
2042 Male, age 76, both hemispheres 27.0
2438 Female, age 94, left hemisphere 17.7
1977 Female, age 85, both hemispheres 17.3
2619 Male, age 74, both hemispheres 14.4
2729 Female, age 91, right hemisphere 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.5
Samples: 197

Max nTPM: 46.9
Min nTPM: 7.8
Std nTPM: 7.6
Median nTPM: 21.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 44.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 44.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 41.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 41.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 40.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 40.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 37.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 37.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.5
FF:10169-103B7 60 years, female 63.8
FF:10153-102I9 76 years, female 41.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 63.4
Samples: 4

Max nTPM: 69.7
Min nTPM: 50.9
Sample A Female 67.6
Sample B Female 69.7
Sample C Male 50.9
Sample D Male 65.2
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 57.2
Min nTPM: 42.4
Sample A Female 57.2
Sample B Female 45.7
Sample C Male 56.2
Sample D Male 42.4
Subiculum
nTPM: 41.5
Samples: 4

Max nTPM: 51.8
Min nTPM: 37.4
Sample A Female 51.8
Sample B Female 38.4
Sample C Male 37.4
Sample D Male 38.4
Ventral hippocampus
nTPM: 43.5
Samples: 4

Max nTPM: 78.0
Min nTPM: 28.0
Sample A Female 28.0
Sample B Female 36.4
Sample C Male 31.6
Sample D Male 78.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.1
Samples: 4

Max nTPM: 47.0
Min nTPM: 33.3
Sample A Male 35.1
Sample B Male 33.3
Sample C Female 37.1
Sample D Female 47.0
Hippocampal formation
nTPM: 48.3
Samples: 4

Max nTPM: 58.5
Min nTPM: 40.2
Sample A Male 40.2
Sample B Male 50.7
Sample C Female 58.5
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
74047904 Antisense, RP_051214_02_C01, Mouse strain C57BL/6J (56 days, male) 12.7
386000 Antisense, RP_040625_01_G10, Mouse strain C57BL/6J (56 days, male) 11.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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