AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		25.667
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:3.5 nTPM
HPA:3.5 nTPM
GTEx:22.4 nTPM
FANTOM5:57.3 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:22.4 nTPM
Allen mouse:2.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA042282
Amygdala mean intensity 25.667
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 20.014
Basal medial amygdaloid nucleus 21.417
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 25.667
Cortical amygdala 17.318
Central amygdala 21.288
Medial amygdaloid nucleus 19.429

AMYGDALA - HPA Brain RNA-seq
Max nTPM 3.5
Sample id Sample description nTPM
Amygdala
nTPM: 0.3
2814 Male, age 76, right hemisphere 1.9
1987 Female, age 91, left hemisphere 0.0
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
Basal amygdala
nTPM: 3.5
2827 Female, age 67, right hemisphere 10.5
2685 Female, age 94, left hemisphere 8.8
2243 Female, age 91, right hemisphere 1.8
2609 Male, age 75, right hemisphere 0.1
1955 Male, age 76, both hemispheres 0.0
2110 Male, age 80, left hemisphere 0.0
Central amygdala
nTPM: 1.3
2826 Female, age 94, left hemisphere 4.1
2701 Female, age 91, right hemisphere 1.8
2239 Male, age 80, left hemisphere 0.6
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
Corticomedial amygdala
nTPM: 1.4
2535 Female, age 67, right hemisphere 6.0
2829 Male, age 80, left hemisphere 2.8
2240 Male, age 76, both hemispheres 0.0
2242 Female, age 91, right hemisphere 0.0
2428 Male, age 75, right hemisphere 0.0
2429 Female, age 94, left hemisphere 0.0
Lateral amygdala
nTPM: 0.5
2830 Female, age 67, right hemisphere 2.0
2255 Female, age 91, right hemisphere 1.1
2534 Female, age 94, left hemisphere 0.3
1883 Male, age 76, both hemispheres 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 0.0
1974 Female, age 91, both hemispheres 0.0
2201 Male, age 74, unknown 0.0
2486 Female, age 94, both hemispheres 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 22.4
Samples: 152

Max nTPM: 66.4
Min nTPM: 8.6
Std nTPM: 7.6
Median nTPM: 20.9
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 66.4
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 50.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 44.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 40.2
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 37.6
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 37.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 36.4
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 34.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 34.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 32.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 32.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 57.3
FF:10151-102I7 76 years, female 57.3

AMYGDALA - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Amygdala
nTPM: 15.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 10.7
Sample A Female 21.1
Sample B Female 10.7
Sample C Male 16.0
Sample D Male 15.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 22.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 22.4
Samples: 4

Max nTPM: 24.8
Min nTPM: 19.8
Sample A Male 24.0
Sample B Male 21.1
Sample C Female 24.8
Sample D Female 19.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.7
71656769 Antisense, RP_050927_04_C08, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.