HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.3 nTPM
HPA:24.3 nTPM
GTEx:24.8 nTPM
FANTOM5:70.2 Scaled Tags Per Million
Pig:49.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012041Antibody CAB017472
Glial cells HighLow
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 23.1
2529 Female, age 94, left hemisphere 24.8
2621 Female, age 67, right hemisphere 23.6
1855 Male, age 76, left hemisphere 23.3
2148 Female, age 91, left hemisphere 22.6
1898 Male, age 80, left hemisphere 22.2
1911 Female, age 85, right hemisphere 22.2
Dentate gyrus
nTPM: 23.0
2531 Female, age 67, both hemispheres 25.3
2246 Female, age 85, both hemispheres 23.9
2010 Male, age 76, both hemispheres 23.3
2530 Female, age 94, left hemisphere 22.8
1927 Female, age 91, both hemispheres 21.9
2528 Male, age 74, both hemispheres 21.1
Entorhinal gyrus
nTPM: 22.6
1787 Male, age 76, left hemisphere 23.8
1938 Female, age 85, left hemisphere 23.4
2117 Female, age 91, right hemisphere 23.1
2764 Male, age 80, right hemisphere 22.6
2686 Male, age 75, right hemisphere 21.9
2613 Female, age 94, left hemisphere 20.7
Hippocampus, CA1
nTPM: 23.9
2045 Male, age 76, both hemispheres 25.7
2749 Male, age 80, left hemisphere 25.3
2527 Male, age 74, both hemispheres 23.1
2082 Female, age 91, right hemisphere 22.9
1873 Female, age 85, both hemispheres 22.6
Hippocampus, CA2
nTPM: 22.6
1892 Male, age 76, both hemispheres 24.8
1940 Female, age 85, left hemisphere 22.9
2249 Male, age 74, both hemispheres 22.8
2113 Female, age 91, right hemisphere 22.0
2437 Female, age 94, left hemisphere 21.9
1963 Male, age 80, left hemisphere 21.0
Hippocampus, CA3
nTPM: 23.3
1867 Male, age 76, both hemispheres 25.1
2137 Male, age 80, left hemisphere 24.6
2436 Male, age 74, both hemispheres 22.7
2861 Female, age 67, both hemispheres 22.7
2620 Female, age 94, left hemisphere 22.6
1891 Female, age 85, both hemispheres 22.2
Parahippocampal cortex
nTPM: 22.6
1850 Male, age 80, both hemispheres 24.7
2245 Female, age 91, both hemispheres 24.0
2532 Female, age 72, left hemisphere 24.0
2250 Female, age 67, right hemisphere 22.8
1933 Female, age 85, both hemispheres 22.5
2018 Male, age 76, both hemispheres 22.3
1990 Female, age 91, right hemisphere 21.9
2622 Female, age 67, right hemisphere 21.8
2693 Female, age 94, both hemispheres 21.2
2692 Male, age 74, both hemispheres 20.9
Perirhinal gyrus
nTPM: 24.3
1794 Male, age 80, right hemisphere 26.3
2848 Male, age 76, right hemisphere 25.7
1841 Female, age 85, right hemisphere 24.3
2521 Female, age 94, right hemisphere 22.6
1847 Female, age 91, left hemisphere 22.4
Subiculum
nTPM: 23.0
2438 Female, age 94, left hemisphere 25.6
1901 Male, age 80, both hemispheres 24.1
1977 Female, age 85, both hemispheres 23.4
2619 Male, age 74, both hemispheres 22.0
2042 Male, age 76, both hemispheres 21.5
2729 Female, age 91, right hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 31.8
Min nTPM: 18.3
Std nTPM: 2.6
Median nTPM: 24.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 30.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 30.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 30.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 29.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 29.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 28.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 28.7
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 28.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.2
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 69.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.6
Samples: 4

Max nTPM: 57.0
Min nTPM: 41.4
Sample A Female 57.0
Sample B Female 50.4
Sample C Male 49.6
Sample D Male 41.4
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 46.7
Min nTPM: 40.0
Sample A Female 46.7
Sample B Female 45.8
Sample C Male 41.8
Sample D Male 40.0
Subiculum
nTPM: 45.6
Samples: 4

Max nTPM: 56.8
Min nTPM: 39.2
Sample A Female 56.8
Sample B Female 43.6
Sample C Male 42.8
Sample D Male 39.2
Ventral hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 50.1
Min nTPM: 39.0
Sample A Female 47.5
Sample B Female 39.0
Sample C Male 48.3
Sample D Male 50.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.