HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:112.2 nTPM
HPA:112.2 nTPM
GTEx:57.2 nTPM
FANTOM5:294.5 Scaled Tags Per Million
Pig:160.5 nTPM
Mouse:314.6 nTPM
Allen mouse:19.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068106Antibody CAB055519
Glial cells LowLow
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.2
Sample id Sample description nTPM
Hippocampus
nTPM: 78.8
2621 Female, age 67, right hemisphere 105.5
1898 Male, age 80, left hemisphere 91.0
2148 Female, age 91, left hemisphere 91.0
1855 Male, age 76, left hemisphere 73.5
2529 Female, age 94, left hemisphere 57.1
1911 Female, age 85, right hemisphere 54.9
Dentate gyrus
nTPM: 84.0
1927 Female, age 91, both hemispheres 148.6
2531 Female, age 67, both hemispheres 116.7
2010 Male, age 76, both hemispheres 71.9
2246 Female, age 85, both hemispheres 62.6
2530 Female, age 94, left hemisphere 55.6
2528 Male, age 74, both hemispheres 48.4
Entorhinal gyrus
nTPM: 56.1
2613 Female, age 94, left hemisphere 91.9
1938 Female, age 85, left hemisphere 69.2
2764 Male, age 80, right hemisphere 58.8
1787 Male, age 76, left hemisphere 58.7
2686 Male, age 75, right hemisphere 43.6
2117 Female, age 91, right hemisphere 14.5
Hippocampus, CA1
nTPM: 112.2
2749 Male, age 80, left hemisphere 235.6
1873 Female, age 85, both hemispheres 97.9
2045 Male, age 76, both hemispheres 83.1
2527 Male, age 74, both hemispheres 82.9
2082 Female, age 91, right hemisphere 61.8
Hippocampus, CA2
nTPM: 62.8
1963 Male, age 80, left hemisphere 135.5
1892 Male, age 76, both hemispheres 96.6
2113 Female, age 91, right hemisphere 42.0
2437 Female, age 94, left hemisphere 35.8
2249 Male, age 74, both hemispheres 34.8
1940 Female, age 85, left hemisphere 32.3
Hippocampus, CA3
nTPM: 100.5
2137 Male, age 80, left hemisphere 188.7
2620 Female, age 94, left hemisphere 134.2
2861 Female, age 67, both hemispheres 118.8
1867 Male, age 76, both hemispheres 68.4
2436 Male, age 74, both hemispheres 56.3
1891 Female, age 85, both hemispheres 36.7
Parahippocampal cortex
nTPM: 48.8
2245 Female, age 91, both hemispheres 84.0
1850 Male, age 80, both hemispheres 62.5
1990 Female, age 91, right hemisphere 49.9
1933 Female, age 85, both hemispheres 49.5
2622 Female, age 67, right hemisphere 49.0
2018 Male, age 76, both hemispheres 47.0
2250 Female, age 67, right hemisphere 44.1
2692 Male, age 74, both hemispheres 41.0
2693 Female, age 94, both hemispheres 33.5
2532 Female, age 72, left hemisphere 27.7
Perirhinal gyrus
nTPM: 66.9
1847 Female, age 91, left hemisphere 116.6
1794 Male, age 80, right hemisphere 71.2
2521 Female, age 94, right hemisphere 57.6
1841 Female, age 85, right hemisphere 47.1
2848 Male, age 76, right hemisphere 42.0
Subiculum
nTPM: 40.8
1901 Male, age 80, both hemispheres 68.3
1977 Female, age 85, both hemispheres 48.2
2729 Female, age 91, right hemisphere 41.0
2619 Male, age 74, both hemispheres 36.4
2438 Female, age 94, left hemisphere 27.5
2042 Male, age 76, both hemispheres 23.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.2
Samples: 197

Max nTPM: 157.5
Min nTPM: 10.3
Std nTPM: 33.1
Median nTPM: 50.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 157.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 157.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 153.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 148.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 132.4
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 126.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 122.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 120.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 119.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 118.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 117.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 294.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 294.5
FF:10169-103B7 60 years, female 344.2
FF:10153-102I9 76 years, female 244.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 160.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 160.5
Samples: 4

Max nTPM: 195.9
Min nTPM: 127.9
Sample A Female 195.9
Sample B Female 184.4
Sample C Male 133.9
Sample D Male 127.9
Entorhinal cortex
nTPM: 140.6
Samples: 4

Max nTPM: 159.0
Min nTPM: 127.0
Sample A Female 159.0
Sample B Female 133.0
Sample C Male 143.3
Sample D Male 127.0
Subiculum
nTPM: 125.5
Samples: 4

Max nTPM: 143.2
Min nTPM: 111.6
Sample A Female 143.2
Sample B Female 111.6
Sample C Male 131.3
Sample D Male 115.7
Ventral hippocampus
nTPM: 147.2
Samples: 4

Max nTPM: 168.0
Min nTPM: 101.9
Sample A Female 158.3
Sample B Female 101.9
Sample C Male 168.0
Sample D Male 160.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 314.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 314.6
Samples: 4

Max nTPM: 361.3
Min nTPM: 273.1
Sample A Male 316.0
Sample B Male 307.9
Sample C Female 273.1
Sample D Female 361.3
Hippocampal formation
nTPM: 289.0
Samples: 4

Max nTPM: 351.7
Min nTPM: 242.6
Sample A Male 250.9
Sample B Male 310.8
Sample C Female 351.7
Sample D Female 242.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.8
74357791 Antisense, RP_051219_04_A10, Mouse strain C57BL/6J (56 days, male) 20.8
68919922 Antisense, RP_050301_02_G08, Mouse strain C57BL/6J (56 days, male) 18.8

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The Human Protein Atlas

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