HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:25.0 nTPM
HPA:25.0 nTPM
GTEx:61.1 nTPM
FANTOM5:74.8 Scaled Tags Per Million
Pig:19.7 nTPM
Mouse:38.0 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
2529 Female, age 94, left hemisphere 29.1
1911 Female, age 85, right hemisphere 24.7
1898 Male, age 80, left hemisphere 24.6
2621 Female, age 67, right hemisphere 24.2
1855 Male, age 76, left hemisphere 23.8
2148 Female, age 91, left hemisphere 23.6
Dentate gyrus
nTPM: 24.6
2530 Female, age 94, left hemisphere 28.7
2528 Male, age 74, both hemispheres 27.5
2246 Female, age 85, both hemispheres 24.2
2010 Male, age 76, both hemispheres 24.0
1927 Female, age 91, both hemispheres 21.7
2531 Female, age 67, both hemispheres 21.2
Entorhinal gyrus
nTPM: 23.7
2117 Female, age 91, right hemisphere 27.0
2764 Male, age 80, right hemisphere 26.5
1787 Male, age 76, left hemisphere 24.8
1938 Female, age 85, left hemisphere 23.9
2613 Female, age 94, left hemisphere 21.0
2686 Male, age 75, right hemisphere 19.0
Hippocampus, CA1
nTPM: 24.2
2749 Male, age 80, left hemisphere 26.4
2527 Male, age 74, both hemispheres 25.5
2082 Female, age 91, right hemisphere 23.9
2045 Male, age 76, both hemispheres 23.0
1873 Female, age 85, both hemispheres 22.2
Hippocampus, CA2
nTPM: 24.6
2249 Male, age 74, both hemispheres 28.8
2437 Female, age 94, left hemisphere 25.1
1963 Male, age 80, left hemisphere 24.8
2113 Female, age 91, right hemisphere 23.9
1940 Female, age 85, left hemisphere 23.2
1892 Male, age 76, both hemispheres 21.8
Hippocampus, CA3
nTPM: 23.2
2436 Male, age 74, both hemispheres 28.3
1891 Female, age 85, both hemispheres 23.5
2620 Female, age 94, left hemisphere 22.4
2861 Female, age 67, both hemispheres 22.2
2137 Male, age 80, left hemisphere 22.0
1867 Male, age 76, both hemispheres 21.1
Parahippocampal cortex
nTPM: 22.1
1990 Female, age 91, right hemisphere 24.5
2245 Female, age 91, both hemispheres 24.0
2250 Female, age 67, right hemisphere 23.7
1850 Male, age 80, both hemispheres 23.1
1933 Female, age 85, both hemispheres 22.1
2018 Male, age 76, both hemispheres 21.9
2532 Female, age 72, left hemisphere 21.3
2693 Female, age 94, both hemispheres 20.8
2622 Female, age 67, right hemisphere 19.8
2692 Male, age 74, both hemispheres 19.7
Perirhinal gyrus
nTPM: 22.7
1847 Female, age 91, left hemisphere 24.4
1794 Male, age 80, right hemisphere 22.9
2848 Male, age 76, right hemisphere 22.4
2521 Female, age 94, right hemisphere 21.9
1841 Female, age 85, right hemisphere 21.7
Subiculum
nTPM: 24.3
1977 Female, age 85, both hemispheres 25.7
1901 Male, age 80, both hemispheres 24.8
2042 Male, age 76, both hemispheres 24.2
2619 Male, age 74, both hemispheres 24.1
2729 Female, age 91, right hemisphere 23.7
2438 Female, age 94, left hemisphere 23.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.1
Samples: 197

Max nTPM: 105.0
Min nTPM: 29.2
Std nTPM: 11.6
Median nTPM: 60.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 105.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 99.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 90.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 88.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 84.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 84.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 83.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 82.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 82.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 82.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 80.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.8
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 71.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 26.1
Min nTPM: 14.9
Sample A Female 26.1
Sample B Female 18.7
Sample C Male 19.3
Sample D Male 14.9
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 17.9
Min nTPM: 11.0
Sample A Female 15.4
Sample B Female 17.9
Sample C Male 16.5
Sample D Male 11.0
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 21.3
Min nTPM: 13.1
Sample A Female 21.3
Sample B Female 13.7
Sample C Male 16.3
Sample D Male 13.1
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 21.1
Min nTPM: 12.3
Sample A Female 16.7
Sample B Female 12.3
Sample C Male 21.1
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.8
Samples: 4

Max nTPM: 37.2
Min nTPM: 34.5
Sample A Male 34.8
Sample B Male 37.2
Sample C Female 36.8
Sample D Female 34.5
Hippocampal formation
nTPM: 38.0
Samples: 4

Max nTPM: 41.9
Min nTPM: 35.4
Sample A Male 41.9
Sample B Male 35.4
Sample C Female 37.1
Sample D Female 37.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
73818779 Antisense, RP_050818_01_H09, Mouse strain C57BL/6J (56 days, male) 2.0

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