HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		40.488
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:197.6 nTPM
HPA:197.6 nTPM
GTEx:190.8 nTPM
FANTOM5:166.0 Scaled Tags Per Million
Pig:181.3 nTPM
Mouse:484.2 nTPM
Allen mouse:21.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026307Antibody HPA051783Antibody HPA051785Antibody HPA053973Antibody CAB006849
Glial cells Not detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells MediumHighMediumHighHigh











HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA026307
Hippocampal formation mean intensity 40.488
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 15.105
Molecular layer of the dentate gyrus 10.553
Granular dentate gyrus 40.149
CA1 - oriens layer 15.341
CA1 - pyramidal layer 34.718
CA1 - radiatum layer 17.470
CA2 - oriens layer 12.846
CA2 - pyramidal layer 40.488
CA2 - radiatum layer 14.949
CA3 - oriens layer 12.518
CA3 - pyramidal layer 26.372
CA3 - radiatum layer 12.023
Stratum lucidum 13.930
Lacunosum moleculare 11.932
Subiculum 9.758

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 197.6
Sample id Sample description nTPM
Hippocampus
nTPM: 153.7
2148 Female, age 91, left hemisphere 265.9
2621 Female, age 67, right hemisphere 212.5
1898 Male, age 80, left hemisphere 147.5
1855 Male, age 76, left hemisphere 128.2
1911 Female, age 85, right hemisphere 109.2
2529 Female, age 94, left hemisphere 59.0
Dentate gyrus
nTPM: 188.8
1927 Female, age 91, both hemispheres 320.1
2531 Female, age 67, both hemispheres 241.8
2530 Female, age 94, left hemisphere 212.9
2010 Male, age 76, both hemispheres 140.2
2528 Male, age 74, both hemispheres 120.1
2246 Female, age 85, both hemispheres 97.5
Entorhinal gyrus
nTPM: 72.4
2613 Female, age 94, left hemisphere 154.5
2686 Male, age 75, right hemisphere 94.5
2764 Male, age 80, right hemisphere 67.3
1938 Female, age 85, left hemisphere 54.5
1787 Male, age 76, left hemisphere 43.5
2117 Female, age 91, right hemisphere 20.2
Hippocampus, CA1
nTPM: 197.6
2749 Male, age 80, left hemisphere 435.6
1873 Female, age 85, both hemispheres 203.2
2045 Male, age 76, both hemispheres 160.1
2527 Male, age 74, both hemispheres 157.8
2082 Female, age 91, right hemisphere 31.0
Hippocampus, CA2
nTPM: 105.8
1963 Male, age 80, left hemisphere 219.4
1892 Male, age 76, both hemispheres 173.3
2437 Female, age 94, left hemisphere 118.0
2249 Male, age 74, both hemispheres 63.7
2113 Female, age 91, right hemisphere 35.2
1940 Female, age 85, left hemisphere 25.0
Hippocampus, CA3
nTPM: 194.2
2620 Female, age 94, left hemisphere 348.5
2137 Male, age 80, left hemisphere 312.3
2861 Female, age 67, both hemispheres 261.7
1867 Male, age 76, both hemispheres 109.4
2436 Male, age 74, both hemispheres 69.0
1891 Female, age 85, both hemispheres 64.1
Parahippocampal cortex
nTPM: 66.6
2245 Female, age 91, both hemispheres 137.5
2622 Female, age 67, right hemisphere 90.9
2693 Female, age 94, both hemispheres 85.5
1990 Female, age 91, right hemisphere 77.7
1850 Male, age 80, both hemispheres 61.1
2692 Male, age 74, both hemispheres 55.9
2532 Female, age 72, left hemisphere 47.6
1933 Female, age 85, both hemispheres 42.1
2250 Female, age 67, right hemisphere 41.2
2018 Male, age 76, both hemispheres 26.5
Perirhinal gyrus
nTPM: 67.6
1847 Female, age 91, left hemisphere 116.0
1794 Male, age 80, right hemisphere 70.0
2521 Female, age 94, right hemisphere 61.0
2848 Male, age 76, right hemisphere 45.9
1841 Female, age 85, right hemisphere 44.9
Subiculum
nTPM: 70.4
1901 Male, age 80, both hemispheres 111.9
2729 Female, age 91, right hemisphere 85.1
2438 Female, age 94, left hemisphere 78.1
2042 Male, age 76, both hemispheres 50.8
1977 Female, age 85, both hemispheres 49.9
2619 Male, age 74, both hemispheres 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 190.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 190.8
Samples: 197

Max nTPM: 519.7
Min nTPM: 8.0
Std nTPM: 120.8
Median nTPM: 159.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 519.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 496.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 485.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 483.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 467.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 444.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 443.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 442.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 438.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 434.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 432.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 166.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 166.0
FF:10169-103B7 60 years, female 230.1
FF:10153-102I9 76 years, female 101.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 181.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 181.3
Samples: 4

Max nTPM: 235.6
Min nTPM: 105.3
Sample A Female 235.6
Sample B Female 203.1
Sample C Male 105.3
Sample D Male 181.3
Entorhinal cortex
nTPM: 146.4
Samples: 4

Max nTPM: 172.5
Min nTPM: 136.4
Sample A Female 172.5
Sample B Female 136.4
Sample C Male 137.6
Sample D Male 139.0
Subiculum
nTPM: 114.1
Samples: 4

Max nTPM: 157.3
Min nTPM: 92.4
Sample A Female 157.3
Sample B Female 95.2
Sample C Male 111.6
Sample D Male 92.4
Ventral hippocampus
nTPM: 144.5
Samples: 4

Max nTPM: 192.6
Min nTPM: 88.9
Sample A Female 144.0
Sample B Female 88.9
Sample C Male 152.4
Sample D Male 192.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 484.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 266.5
Samples: 4

Max nTPM: 278.9
Min nTPM: 248.3
Sample A Male 278.9
Sample B Male 248.3
Sample C Female 272.9
Sample D Female 265.7
Hippocampal formation
nTPM: 484.2
Samples: 4

Max nTPM: 573.9
Min nTPM: 397.1
Sample A Male 397.1
Sample B Male 538.7
Sample C Female 573.9
Sample D Female 427.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.7
70719036 Antisense, RP_050426_01_E04, Mouse strain C57BL/6J (56 days, male) 21.7

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The Human Protein Atlas

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