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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:343.7 nTPM
FANTOM5:446.8 Scaled Tags Per Million
Pig:129.0 nTPM

CAUDATE - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA059237
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 343.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 343.7
Samples: 246

Max nTPM: 895.3
Min nTPM: 26.6
Std nTPM: 158.3
Median nTPM: 325.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 895.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 864.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 778.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 726.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 710.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 690.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 677.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 672.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 660.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 659.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 626.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 612.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 607.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 607.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 601.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 589.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 583.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 581.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 571.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 559.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 553.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 547.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 547.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 542.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 539.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 533.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 531.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 526.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 526.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 525.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 521.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 519.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 518.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 517.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 516.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 516.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 513.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 510.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 510.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 509.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 507.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 507.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 501.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 493.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 493.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 492.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 491.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 490.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 490.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 486.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 483.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 482.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 480.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 478.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 478.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 473.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 472.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 470.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 467.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 465.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 462.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 452.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 448.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 446.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 446.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 444.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 440.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 440.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 439.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 436.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 436.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 435.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 432.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 432.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 430.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 425.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 424.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 423.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 421.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 421.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 419.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 408.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 408.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 407.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 407.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 398.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 398.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 394.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 393.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 389.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 388.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 387.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 387.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 384.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 381.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 379.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 376.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 373.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 372.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 372.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 369.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 368.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 365.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 363.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 357.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 356.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 354.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 352.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 352.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 351.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 348.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 345.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 344.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 344.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 342.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 340.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 335.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 334.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 334.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 330.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 329.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 329.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 327.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 323.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 320.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 320.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 318.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 318.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 316.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 314.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 309.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 308.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 308.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 308.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 307.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 306.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 305.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 304.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 304.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 304.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 302.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 294.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 294.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 293.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 291.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 291.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 288.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 288.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 285.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 284.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 278.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 278.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 276.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 271.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 268.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 267.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 266.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 263.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 263.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 260.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 260.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 260.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 260.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 260.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 259.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 258.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 257.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 254.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 249.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 247.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 246.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 246.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 244.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 244.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 243.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 239.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 239.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 238.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 236.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 236.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 236.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 231.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 230.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 230.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 222.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 220.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 214.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 214.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 210.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 210.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 210.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 209.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 203.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 203.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 203.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 201.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 201.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 201.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 195.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 193.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 189.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 189.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 185.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 184.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 181.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 179.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 179.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 177.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 175.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 169.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 166.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 166.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 165.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 165.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 164.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 162.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 160.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 158.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 158.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 156.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 156.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 155.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 154.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 152.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 146.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 140.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 137.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 133.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 131.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 130.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 128.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 125.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 123.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 121.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 119.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 119.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 116.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 101.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 98.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 92.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 79.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 70.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 56.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 54.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 45.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 26.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 446.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 446.8
FF:10164-103B2 76 years, female 446.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 129.0
Pig sample Sample description nTPM
Caudate
nTPM: 129.0
Samples: 4

Max nTPM: 156.2
Min nTPM: 97.8
Sample A Female 97.8
Sample B Female 141.5
Sample C Male 156.2
Sample D Male 120.5

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