HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.4 nTPM
HPA:28.4 nTPM
GTEx:36.6 nTPM
FANTOM5:56.1 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:26.7 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017899
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
2529 Female, age 94, left hemisphere 26.6
2621 Female, age 67, right hemisphere 25.9
2148 Female, age 91, left hemisphere 24.7
1855 Male, age 76, left hemisphere 24.4
1911 Female, age 85, right hemisphere 23.9
1898 Male, age 80, left hemisphere 23.0
Dentate gyrus
nTPM: 24.2
2531 Female, age 67, both hemispheres 28.5
2530 Female, age 94, left hemisphere 25.6
2246 Female, age 85, both hemispheres 24.1
2010 Male, age 76, both hemispheres 22.8
1927 Female, age 91, both hemispheres 22.1
2528 Male, age 74, both hemispheres 22.1
Entorhinal gyrus
nTPM: 28.4
2613 Female, age 94, left hemisphere 31.2
2764 Male, age 80, right hemisphere 30.5
2686 Male, age 75, right hemisphere 30.0
1787 Male, age 76, left hemisphere 28.4
1938 Female, age 85, left hemisphere 25.8
2117 Female, age 91, right hemisphere 24.2
Hippocampus, CA1
nTPM: 23.8
2045 Male, age 76, both hemispheres 26.2
1873 Female, age 85, both hemispheres 23.4
2082 Female, age 91, right hemisphere 23.4
2527 Male, age 74, both hemispheres 23.0
2749 Male, age 80, left hemisphere 23.0
Hippocampus, CA2
nTPM: 24.3
2437 Female, age 94, left hemisphere 29.2
1940 Female, age 85, left hemisphere 27.9
2113 Female, age 91, right hemisphere 23.5
1892 Male, age 76, both hemispheres 23.3
2249 Male, age 74, both hemispheres 21.3
1963 Male, age 80, left hemisphere 20.6
Hippocampus, CA3
nTPM: 24.6
2861 Female, age 67, both hemispheres 28.4
2620 Female, age 94, left hemisphere 27.6
1891 Female, age 85, both hemispheres 24.0
1867 Male, age 76, both hemispheres 23.7
2137 Male, age 80, left hemisphere 22.6
2436 Male, age 74, both hemispheres 20.9
Parahippocampal cortex
nTPM: 27.9
2622 Female, age 67, right hemisphere 34.7
2245 Female, age 91, both hemispheres 29.9
2532 Female, age 72, left hemisphere 28.2
1933 Female, age 85, both hemispheres 27.7
2693 Female, age 94, both hemispheres 27.2
1850 Male, age 80, both hemispheres 27.0
1990 Female, age 91, right hemisphere 26.9
2018 Male, age 76, both hemispheres 26.8
2692 Male, age 74, both hemispheres 26.5
2250 Female, age 67, right hemisphere 24.4
Perirhinal gyrus
nTPM: 25.9
2848 Male, age 76, right hemisphere 27.6
1841 Female, age 85, right hemisphere 26.8
1794 Male, age 80, right hemisphere 26.0
1847 Female, age 91, left hemisphere 25.6
2521 Female, age 94, right hemisphere 23.5
Subiculum
nTPM: 24.8
2619 Male, age 74, both hemispheres 25.9
2042 Male, age 76, both hemispheres 25.5
2438 Female, age 94, left hemisphere 25.5
1977 Female, age 85, both hemispheres 25.1
1901 Male, age 80, both hemispheres 23.5
2729 Female, age 91, right hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.6
Samples: 197

Max nTPM: 95.5
Min nTPM: 12.8
Std nTPM: 10.8
Median nTPM: 34.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 95.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 78.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 74.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 71.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 70.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 61.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 56.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 54.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 54.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 53.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 53.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.1
FF:10153-102I9 76 years, female 64.1
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.3
Sample A Female 19.6
Sample B Female 16.7
Sample C Male 14.0
Sample D Male 13.3
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 16.3
Min nTPM: 11.1
Sample A Female 12.7
Sample B Female 16.3
Sample C Male 16.2
Sample D Male 11.1
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 21.3
Min nTPM: 12.5
Sample A Female 21.3
Sample B Female 14.5
Sample C Male 13.3
Sample D Male 12.5
Ventral hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 19.8
Min nTPM: 11.9
Sample A Female 14.5
Sample B Female 11.9
Sample C Male 19.8
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 28.5
Min nTPM: 22.4
Sample A Male 22.4
Sample B Male 24.1
Sample C Female 28.5
Sample D Female 24.4
Hippocampal formation
nTPM: 26.7
Samples: 4

Max nTPM: 29.8
Min nTPM: 24.1
Sample A Male 27.4
Sample B Male 24.1
Sample C Female 25.6
Sample D Female 29.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
67809268 Antisense, RP_040922_01_E12, Mouse strain C57BL/6J (56 days, male) 9.8

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