HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:25.9 nTPM
HPA:25.9 nTPM
GTEx:11.4 nTPM
FANTOM5:57.1 Scaled Tags Per Million
Pig:27.9 nTPM
Mouse:54.0 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
2148 Female, age 91, left hemisphere 23.5
2621 Female, age 67, right hemisphere 16.1
1898 Male, age 80, left hemisphere 11.8
1855 Male, age 76, left hemisphere 9.8
1911 Female, age 85, right hemisphere 8.2
2529 Female, age 94, left hemisphere 1.3
Dentate gyrus
nTPM: 14.2
2531 Female, age 67, both hemispheres 34.7
1927 Female, age 91, both hemispheres 27.4
2246 Female, age 85, both hemispheres 8.9
2010 Male, age 76, both hemispheres 7.7
2528 Male, age 74, both hemispheres 5.2
2530 Female, age 94, left hemisphere 1.6
Entorhinal gyrus
nTPM: 8.3
2613 Female, age 94, left hemisphere 15.5
1938 Female, age 85, left hemisphere 10.8
2764 Male, age 80, right hemisphere 10.7
1787 Male, age 76, left hemisphere 6.9
2686 Male, age 75, right hemisphere 4.0
2117 Female, age 91, right hemisphere 2.0
Hippocampus, CA1
nTPM: 20.8
2749 Male, age 80, left hemisphere 55.9
1873 Female, age 85, both hemispheres 16.3
2045 Male, age 76, both hemispheres 16.3
2527 Male, age 74, both hemispheres 8.1
2082 Female, age 91, right hemisphere 7.5
Hippocampus, CA2
nTPM: 8.5
1963 Male, age 80, left hemisphere 22.7
1892 Male, age 76, both hemispheres 11.5
2113 Female, age 91, right hemisphere 6.2
2437 Female, age 94, left hemisphere 4.9
1940 Female, age 85, left hemisphere 3.6
2249 Male, age 74, both hemispheres 2.4
Hippocampus, CA3
nTPM: 25.9
2137 Male, age 80, left hemisphere 64.2
2620 Female, age 94, left hemisphere 35.2
2861 Female, age 67, both hemispheres 22.5
2436 Male, age 74, both hemispheres 15.9
1867 Male, age 76, both hemispheres 13.6
1891 Female, age 85, both hemispheres 3.7
Parahippocampal cortex
nTPM: 9.2
2245 Female, age 91, both hemispheres 22.4
2693 Female, age 94, both hemispheres 15.4
2250 Female, age 67, right hemisphere 11.0
1933 Female, age 85, both hemispheres 9.9
1990 Female, age 91, right hemisphere 8.4
2018 Male, age 76, both hemispheres 8.0
2532 Female, age 72, left hemisphere 7.1
1850 Male, age 80, both hemispheres 6.4
2622 Female, age 67, right hemisphere 3.6
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 14.7
2521 Female, age 94, right hemisphere 24.9
1847 Female, age 91, left hemisphere 21.9
1794 Male, age 80, right hemisphere 13.3
1841 Female, age 85, right hemisphere 8.8
2848 Male, age 76, right hemisphere 4.5
Subiculum
nTPM: 6.4
1901 Male, age 80, both hemispheres 19.1
1977 Female, age 85, both hemispheres 10.3
2729 Female, age 91, right hemisphere 6.8
2619 Male, age 74, both hemispheres 2.5
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.4
Samples: 197

Max nTPM: 31.4
Min nTPM: 0.1
Std nTPM: 7.6
Median nTPM: 10.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 31.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 30.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 29.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 29.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 26.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 25.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 25.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 24.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 24.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 24.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.1
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 35.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 33.3
Min nTPM: 19.2
Sample A Female 27.8
Sample B Female 31.5
Sample C Male 19.2
Sample D Male 33.3
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 27.6
Min nTPM: 23.5
Sample A Female 27.6
Sample B Female 23.5
Sample C Male 27.5
Sample D Male 25.8
Subiculum
nTPM: 24.5
Samples: 4

Max nTPM: 35.9
Min nTPM: 18.1
Sample A Female 35.9
Sample B Female 24.1
Sample C Male 19.8
Sample D Male 18.1
Ventral hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 25.8
Min nTPM: 19.9
Sample A Female 19.9
Sample B Female 23.1
Sample C Male 21.8
Sample D Male 25.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 59.4
Min nTPM: 39.3
Sample A Male 39.3
Sample B Male 52.8
Sample C Female 54.5
Sample D Female 59.4
Hippocampal formation
nTPM: 54.0
Samples: 4

Max nTPM: 62.6
Min nTPM: 48.3
Sample A Male 51.6
Sample B Male 53.3
Sample C Female 62.6
Sample D Female 48.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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