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MPC1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:106.6 nTPM
FANTOM5:111.7 Scaled Tags Per Million
Pig:92.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045119
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 106.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 106.6
Samples: 246

Max nTPM: 312.4
Min nTPM: 47.6
Std nTPM: 29.8
Median nTPM: 103.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 312.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 284.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 227.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 195.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 192.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 185.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 177.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 169.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 164.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 163.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 159.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 154.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 152.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 151.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 147.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 145.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 144.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 142.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 142.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 141.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 137.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 135.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 133.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 133.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 132.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 132.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 131.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 131.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 130.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 128.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 128.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 127.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 127.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 127.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 126.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 125.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 125.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 125.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 125.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 125.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 123.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 123.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 123.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 123.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 122.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 122.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 120.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 119.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 119.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 118.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 118.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 117.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 117.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 117.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 117.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 117.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 117.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 117.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 117.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 116.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 116.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 116.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 116.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 115.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 115.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 115.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 115.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 113.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 113.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 113.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 112.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 112.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 112.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 112.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 112.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 112.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 112.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 112.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 111.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 111.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 111.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 111.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 111.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 110.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 110.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 110.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 109.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 109.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 109.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 109.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 109.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 108.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 108.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 108.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 107.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 107.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 107.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 106.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 106.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 105.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 105.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 105.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 105.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 105.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 105.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 105.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 104.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 104.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 104.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 104.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 104.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 103.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 103.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 103.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 103.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 103.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 103.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 103.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 103.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 102.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 102.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 101.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 100.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 100.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 100.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 100.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 100.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 100.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 100.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 99.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 99.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 99.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 99.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 98.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 98.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 98.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 97.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 97.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 96.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 96.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 95.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 95.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 95.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 94.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 94.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 94.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 94.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 94.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 94.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 94.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 94.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 93.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 93.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 93.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 93.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 93.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 92.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 92.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 92.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 91.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 91.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 91.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 91.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 90.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 90.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 90.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 90.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 90.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 89.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 89.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 89.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 89.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 89.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 88.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 88.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 88.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 88.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 88.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 88.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 88.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 87.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 86.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 86.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 86.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 85.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 85.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 85.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 85.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 85.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 85.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 84.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 84.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 84.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 84.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 83.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 82.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 82.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 82.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 82.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 82.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 81.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 81.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 80.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 80.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 80.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 80.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 80.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 79.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 79.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 79.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 78.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 78.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 78.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 77.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 77.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 75.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 74.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 73.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 72.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 70.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 68.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 67.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 66.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 66.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 65.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 59.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 59.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 59.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 47.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 111.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 111.7
FF:10164-103B2 76 years, female 111.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 92.2
Pig sample Sample description nTPM
Caudate
nTPM: 92.2
Samples: 4

Max nTPM: 102.8
Min nTPM: 83.5
Sample A Female 83.5
Sample B Female 96.9
Sample C Male 102.8
Sample D Male 85.5

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