COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:44.2 nTPM
HPA:8.9 nTPM
GTEx:44.2 nTPM
FANTOM5:46.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 8.9
overview
Male, age 54 		Colon sample 67
nTPM: 13.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 12.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 10.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 15.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 8.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 5.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 9.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 44.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 44.2
Samples: 373

Max nTPM: 94.6
Min nTPM: 10.6
Std nTPM: 13.0
Median nTPM: 43.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 94.6
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 93.5
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 83.0
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 81.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 79.6
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 78.4
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 77.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 75.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 75.6
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 74.3
GTEX-1QP28-2226-SM-DTX8C 50-59 years, female 74.1
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Colon - Transverse
Average nTPM: 27.4
Samples: 406

Max nTPM: 92.3
Min nTPM: 4.2
Std nTPM: 14.7
Median nTPM: 25.3
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 92.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 71.3
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 69.5
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 67.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 67.5
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 65.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 65.5
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 65.1
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 65.1
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 63.6
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 62.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 46.9
FF:10014-101C5 62,83,84 years, mixed 46.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.