HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:79.9 nTPM
HPA:79.9 nTPM
GTEx:67.8 nTPM
FANTOM5:17.0 Scaled Tags Per Million
Pig:69.8 nTPM
Mouse:103.0 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046164
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.9
Sample id Sample description nTPM
Hippocampus
nTPM: 76.6
2529 Female, age 94, left hemisphere 86.9
1898 Male, age 80, left hemisphere 80.3
2621 Female, age 67, right hemisphere 78.4
2148 Female, age 91, left hemisphere 73.1
1911 Female, age 85, right hemisphere 71.3
1855 Male, age 76, left hemisphere 69.5
Dentate gyrus
nTPM: 79.9
2530 Female, age 94, left hemisphere 108.7
2010 Male, age 76, both hemispheres 81.9
2531 Female, age 67, both hemispheres 73.4
2246 Female, age 85, both hemispheres 73.3
1927 Female, age 91, both hemispheres 72.3
2528 Male, age 74, both hemispheres 70.1
Entorhinal gyrus
nTPM: 78.6
2686 Male, age 75, right hemisphere 93.9
1787 Male, age 76, left hemisphere 78.8
1938 Female, age 85, left hemisphere 78.2
2117 Female, age 91, right hemisphere 76.5
2764 Male, age 80, right hemisphere 75.3
2613 Female, age 94, left hemisphere 68.8
Hippocampus, CA1
nTPM: 75.5
2749 Male, age 80, left hemisphere 79.4
1873 Female, age 85, both hemispheres 79.1
2045 Male, age 76, both hemispheres 78.8
2082 Female, age 91, right hemisphere 71.7
2527 Male, age 74, both hemispheres 68.3
Hippocampus, CA2
nTPM: 78.2
1892 Male, age 76, both hemispheres 96.3
1963 Male, age 80, left hemisphere 84.4
2437 Female, age 94, left hemisphere 76.3
2113 Female, age 91, right hemisphere 71.7
1940 Female, age 85, left hemisphere 71.4
2249 Male, age 74, both hemispheres 69.1
Hippocampus, CA3
nTPM: 72.7
1867 Male, age 76, both hemispheres 85.8
1891 Female, age 85, both hemispheres 77.7
2137 Male, age 80, left hemisphere 75.7
2861 Female, age 67, both hemispheres 71.6
2436 Male, age 74, both hemispheres 68.3
2620 Female, age 94, left hemisphere 57.4
Parahippocampal cortex
nTPM: 71.0
1850 Male, age 80, both hemispheres 87.1
2018 Male, age 76, both hemispheres 77.6
2692 Male, age 74, both hemispheres 73.3
1990 Female, age 91, right hemisphere 72.5
2245 Female, age 91, both hemispheres 70.0
2532 Female, age 72, left hemisphere 69.3
1933 Female, age 85, both hemispheres 68.2
2250 Female, age 67, right hemisphere 67.5
2622 Female, age 67, right hemisphere 65.3
2693 Female, age 94, both hemispheres 59.3
Perirhinal gyrus
nTPM: 77.1
2848 Male, age 76, right hemisphere 84.5
1794 Male, age 80, right hemisphere 83.3
1841 Female, age 85, right hemisphere 78.9
1847 Female, age 91, left hemisphere 77.6
2521 Female, age 94, right hemisphere 60.9
Subiculum
nTPM: 77.3
2042 Male, age 76, both hemispheres 83.0
2438 Female, age 94, left hemisphere 82.1
1901 Male, age 80, both hemispheres 77.9
1977 Female, age 85, both hemispheres 77.6
2729 Female, age 91, right hemisphere 72.1
2619 Male, age 74, both hemispheres 71.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.8
Samples: 197

Max nTPM: 150.5
Min nTPM: 35.0
Std nTPM: 20.2
Median nTPM: 63.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 150.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 142.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 132.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 131.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 128.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 123.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 123.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 116.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 115.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 108.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 107.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.0
FF:10153-102I9 76 years, female 17.2
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.8
Samples: 4

Max nTPM: 81.1
Min nTPM: 59.6
Sample A Female 81.1
Sample B Female 71.2
Sample C Male 67.4
Sample D Male 59.6
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 63.5
Min nTPM: 48.1
Sample A Female 60.5
Sample B Female 63.5
Sample C Male 55.9
Sample D Male 48.1
Subiculum
nTPM: 57.7
Samples: 4

Max nTPM: 74.1
Min nTPM: 50.3
Sample A Female 74.1
Sample B Female 52.9
Sample C Male 53.5
Sample D Male 50.3
Ventral hippocampus
nTPM: 62.7
Samples: 4

Max nTPM: 74.0
Min nTPM: 48.9
Sample A Female 58.1
Sample B Female 48.9
Sample C Male 69.8
Sample D Male 74.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 103.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.8
Samples: 4

Max nTPM: 98.9
Min nTPM: 85.1
Sample A Male 91.3
Sample B Male 85.1
Sample C Female 92.0
Sample D Female 98.9
Hippocampal formation
nTPM: 103.0
Samples: 4

Max nTPM: 116.1
Min nTPM: 94.2
Sample A Male 96.7
Sample B Male 104.9
Sample C Female 116.1
Sample D Female 94.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
70919489 Antisense, RP_050713_01_D11, Mouse strain C57BL/6J (56 days, male) 1.2

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