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RPL18
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:956.6 nTPM
HPA:825.5 nTPM
GTEx:956.6 nTPM
FANTOM5:337.2 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA046572
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 825.5
overview
Male, age 65
Small intestine sample 232
nTPM: 1037.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 823.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 738.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 701.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 956.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 956.6
Samples: 187

Max nTPM: 1998.6
Min nTPM: 546.5
Std nTPM: 252.9
Median nTPM: 913.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1998.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 1677.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1638.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1599.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1575.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1565.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1534.9
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1486.0
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1477.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1445.8
GTEX-183FY-1626-SM-793D8 20-29 years, male 1435.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1395.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1378.5
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1339.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1322.1
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1315.2
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1306.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1306.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1293.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1269.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1241.8
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1233.2
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1231.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1229.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1216.1
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1215.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1214.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1214.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1208.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1205.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1205.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1204.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1171.6
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1170.7
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1167.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1161.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1159.3
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1153.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1151.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1149.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1140.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1135.1
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1128.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1127.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1127.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1120.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1120.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1116.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1091.5
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1089.6
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1088.4
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1084.4
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1082.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1079.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1077.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1068.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1063.4
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1062.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1055.6
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1051.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1051.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1043.1
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1042.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1037.8
GTEX-1C475-1426-SM-793CH 40-49 years, female 1037.1
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1036.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1035.3
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1033.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1023.2
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1021.2
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1007.3
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1006.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1004.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1001.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1000.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 996.3
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 996.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 991.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 989.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 988.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 964.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 962.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 951.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 948.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 946.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 939.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 938.2
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 931.9
GTEX-1192X-2526-SM-59868 50-59 years, male 928.3
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 924.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 924.1
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 923.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 920.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 913.5
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 903.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 896.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 889.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 884.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 882.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 881.2
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 879.1
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 878.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 877.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 873.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 865.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 862.3
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 857.6
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 855.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 854.1
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 852.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 851.3
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 847.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 845.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 844.2
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 841.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 840.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 836.3
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 836.1
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 831.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 828.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 819.8
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 817.3
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 811.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 808.4
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 805.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 802.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 797.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 797.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 793.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 791.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 785.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 783.1
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 781.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 779.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 779.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 779.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 775.0
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 772.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 759.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 758.9
GTEX-13111-1426-SM-5DUW3 50-59 years, male 752.9
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 751.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 749.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 745.1
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 744.5
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 741.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 740.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 740.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 733.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 730.3
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 723.7
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 716.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 715.5
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 714.6
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 711.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 711.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 711.0
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 707.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 705.0
GTEX-1122O-1326-SM-5H11F 60-69 years, female 703.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 702.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 701.2
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 700.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 699.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 692.8
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 689.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 688.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 687.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 686.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 685.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 681.0
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 673.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 670.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 659.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 656.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 652.6
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 637.7
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 630.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 619.9
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 612.2
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 607.8
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 606.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 594.6
GTEX-ZTSS-0926-SM-59865 40-49 years, male 582.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 575.6
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 568.8
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 546.5
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 337.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 337.2
FF:10024-101D6 15,40,85 years, mixed 337.2

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