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U2AF2
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  • U2AF2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:58.9 nTPM
FANTOM5:136.8 Scaled Tags Per Million
Pig:60.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043562Antibody CAB010910
Glial cells LowHigh
Neuronal cells Not detectedHigh




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 58.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 58.9
Samples: 246

Max nTPM: 86.9
Min nTPM: 35.7
Std nTPM: 8.3
Median nTPM: 59.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 86.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 82.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 82.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 79.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 78.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 78.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 77.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 77.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 75.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 75.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 74.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 73.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 72.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 71.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 71.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 71.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 71.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 70.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 70.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 70.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 69.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 69.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 69.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 68.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 68.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 68.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 67.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 67.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 67.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 67.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 67.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 66.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 66.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 66.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 66.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 65.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 65.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 65.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 65.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 65.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 65.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 64.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 64.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 64.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 64.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 64.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 64.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 64.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 64.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 63.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 63.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 63.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 63.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 63.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 63.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 63.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 63.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 63.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 62.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 62.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 62.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 62.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 62.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 62.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 62.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 61.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 61.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 61.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 61.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 61.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 61.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 61.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 60.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 60.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 60.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 60.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 60.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 60.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 60.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 60.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 60.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 60.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 60.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 59.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 59.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 59.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 59.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 59.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 59.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 59.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 59.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 59.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 59.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 59.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 59.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 59.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 58.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 58.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 58.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 58.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 58.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 58.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 58.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 58.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 58.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 57.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 57.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 57.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 57.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 57.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 57.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 57.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 57.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 57.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 56.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 56.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 56.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 56.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 56.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 56.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 55.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 55.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 55.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 55.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 55.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 55.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 55.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 55.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 55.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 55.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 55.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 55.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 55.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 55.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 54.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 54.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 54.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 54.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 54.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 54.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 54.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 54.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 54.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 54.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 54.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 54.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 53.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 53.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 53.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 53.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 53.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 53.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 53.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 53.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 52.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 52.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 52.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 52.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 52.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 52.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 52.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 51.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 51.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 51.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 51.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 51.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 50.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 49.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 49.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 49.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 49.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 49.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 49.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 48.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 48.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 47.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 47.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 47.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 46.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 46.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 46.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 45.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 45.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 45.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 45.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 44.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 44.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 40.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 39.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 36.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 35.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 35.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 136.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 136.8
FF:10164-103B2 76 years, female 136.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 60.9
Pig sample Sample description nTPM
Caudate
nTPM: 60.9
Samples: 4

Max nTPM: 68.6
Min nTPM: 54.6
Sample A Female 54.6
Sample B Female 65.4
Sample C Male 68.6
Sample D Male 54.8

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