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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:101.1 nTPM
FANTOM5:101.6 Scaled Tags Per Million
Pig:59.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB009729
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 101.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 101.1
Samples: 246

Max nTPM: 191.5
Min nTPM: 33.6
Std nTPM: 30.5
Median nTPM: 99.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 191.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 187.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 177.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 176.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 170.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 163.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 160.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 158.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 157.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 157.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 156.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 156.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 156.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 152.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 152.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 150.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 150.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 149.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 149.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 146.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 145.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 144.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 143.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 143.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 142.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 142.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 142.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 139.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 138.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 136.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 136.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 136.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 136.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 133.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 132.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 132.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 131.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 131.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 130.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 129.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 128.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 128.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 128.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 127.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 127.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 127.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 126.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 126.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 126.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 125.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 125.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 124.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 124.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 124.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 124.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 124.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 124.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 124.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 124.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 124.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 124.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 123.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 123.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 122.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 122.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 121.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 121.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 121.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 121.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 121.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 120.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 119.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 119.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 119.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 119.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 118.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 118.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 117.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 117.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 115.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 115.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 114.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 114.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 113.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 113.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 113.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 112.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 112.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 111.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 111.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 111.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 111.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 111.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 111.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 110.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 110.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 110.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 110.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 109.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 109.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 109.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 108.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 108.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 108.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 108.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 107.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 106.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 106.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 105.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 105.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 105.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 102.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 101.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 101.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 101.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 101.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 101.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 100.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 100.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 99.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 99.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 98.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 98.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 98.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 97.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 97.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 96.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 96.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 94.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 93.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 92.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 92.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 92.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 91.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 91.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 91.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 91.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 90.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 90.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 89.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 89.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 89.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 89.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 88.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 88.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 87.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 87.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 87.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 86.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 86.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 86.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 85.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 85.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 85.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 85.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 84.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 84.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 83.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 83.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 83.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 83.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 82.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 82.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 82.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 81.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 81.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 81.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 81.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 81.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 81.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 80.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 79.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 79.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 78.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 78.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 78.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 77.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 77.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 77.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 76.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 76.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 76.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 75.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 75.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 74.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 74.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 74.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 74.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 72.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 72.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 72.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 70.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 70.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 69.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 69.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 68.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 67.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 65.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 64.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 64.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 64.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 63.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 62.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 62.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 62.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 62.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 61.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 60.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 60.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 60.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 60.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 59.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 58.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 58.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 58.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 57.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 57.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 57.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 53.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 53.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 51.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 50.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 42.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 36.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 33.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 101.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 101.6
FF:10164-103B2 76 years, female 101.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 59.5
Pig sample Sample description nTPM
Caudate
nTPM: 59.5
Samples: 4

Max nTPM: 72.0
Min nTPM: 47.2
Sample A Female 47.2
Sample B Female 65.8
Sample C Male 72.0
Sample D Male 52.8

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