COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.7 nTPM
HPA:28.6 nTPM
GTEx:53.7 nTPM
FANTOM5:41.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043041Antibody HPA061143
Endothelial cells MediumLow
Glandular cells HighLow
Peripheral nerve/ganglion Medium-



COLON - HPA RNA-seqi
Average nTPM 28.6
overview
Male, age 54 		Colon sample 67
nTPM: 28.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 28.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 30.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 33
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 28.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 20.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 27
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 27.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 33.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 26
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 31.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 32.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 53.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 53.7
Samples: 373

Max nTPM: 127.8
Min nTPM: 22.4
Std nTPM: 14.4
Median nTPM: 52.3
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 127.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 112.1
GTEX-1PIEJ-1826-SM-EWRMN 20-29 years, female 96.0
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 94.5
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 89.8
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 89.8
GTEX-1LVAM-1726-SM-DHXKQ 50-59 years, female 89.8
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 87.8
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 87.8
GTEX-1KANA-1726-SM-CY8IG 20-29 years, male 87.1
GTEX-1AX9K-1626-SM-73KUS 50-59 years, male 85.4
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Colon - Transverse
Average nTPM: 42.7
Samples: 406

Max nTPM: 74.1
Min nTPM: 18.7
Std nTPM: 10.0
Median nTPM: 41.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 74.1
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 72.2
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 71.8
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 67.2
GTEX-18A7B-2026-SM-72D71 70-79 years, male 66.2
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 66.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 66.0
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 65.9
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 65.6
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 65.2
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 64.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 41.5
FF:10014-101C5 62,83,84 years, mixed 41.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.