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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:74.1 nTPM
FANTOM5:170.6 Scaled Tags Per Million
Pig:45.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA007611
Glial cells High
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 74.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 74.1
Samples: 246

Max nTPM: 331.8
Min nTPM: 15.0
Std nTPM: 50.1
Median nTPM: 63.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 331.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 326.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 294.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 246.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 227.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 214.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 213.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 210.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 196.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 193.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 182.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 181.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 181.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 167.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 166.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 160.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 153.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 149.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 148.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 146.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 141.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 132.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 130.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 128.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 126.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 126.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 123.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 122.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 121.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 121.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 114.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 113.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 111.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 110.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 109.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 109.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 107.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 106.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 106.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 104.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 101.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 100.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 99.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 99.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 98.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 97.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 97.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 95.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 94.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 94.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 94.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 93.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 91.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 91.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 91.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 91.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 90.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 90.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 90.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 89.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 87.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 86.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 86.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 86.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 84.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 83.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 83.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 82.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 81.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 81.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 81.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 80.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 80.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 79.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 79.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 78.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 77.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 77.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 76.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 76.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 75.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 74.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 74.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 74.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 74.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 72.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 72.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 72.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 72.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 71.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 71.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 71.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 70.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 69.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 69.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 68.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 68.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 68.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 67.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 67.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 66.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 66.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 65.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 65.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 64.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 64.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 64.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 64.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 63.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 63.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 63.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 63.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 61.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 60.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 60.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 60.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 59.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 58.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 57.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 57.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 57.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 57.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 56.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 56.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 55.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 55.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 55.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 54.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 54.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 54.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 53.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 52.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 51.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 51.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 51.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 51.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 50.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 50.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 50.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 49.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 48.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 48.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 48.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 47.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 47.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 46.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 46.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 46.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 46.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 45.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 44.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 44.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 44.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 44.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 44.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 43.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 43.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 42.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 42.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 41.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 41.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 41.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 41.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 41.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 41.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 40.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 39.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 39.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 38.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 37.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 36.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 36.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 35.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 35.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 35.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 35.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 35.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 35.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 35.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 35.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 34.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 34.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 34.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 34.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 34.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 34.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 34.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 33.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 33.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 32.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 32.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 31.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 30.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 30.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 30.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 29.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 29.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 29.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 28.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 27.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 26.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 25.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 25.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 25.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 25.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 23.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 23.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 23.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 22.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 22.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 21.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 21.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 18.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 17.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 16.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 15.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 15.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 15.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 170.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 170.6
FF:10164-103B2 76 years, female 170.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 45.2
Pig sample Sample description nTPM
Caudate
nTPM: 45.2
Samples: 4

Max nTPM: 50.7
Min nTPM: 38.7
Sample A Female 38.7
Sample B Female 45.1
Sample C Male 50.7
Sample D Male 46.1

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