HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:45.0 nTPM
HPA:45.0 nTPM
GTEx:28.5 nTPM
FANTOM5:96.2 Scaled Tags Per Million
Pig:33.9 nTPM
Mouse:63.1 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.0
Sample id Sample description nTPM
Hippocampus
nTPM: 41.7
1855 Male, age 76, left hemisphere 46.1
2621 Female, age 67, right hemisphere 46.0
1898 Male, age 80, left hemisphere 42.3
2148 Female, age 91, left hemisphere 41.9
2529 Female, age 94, left hemisphere 39.7
1911 Female, age 85, right hemisphere 33.9
Dentate gyrus
nTPM: 40.1
1927 Female, age 91, both hemispheres 45.3
2530 Female, age 94, left hemisphere 45.1
2531 Female, age 67, both hemispheres 40.8
2246 Female, age 85, both hemispheres 39.0
2010 Male, age 76, both hemispheres 37.4
2528 Male, age 74, both hemispheres 32.9
Entorhinal gyrus
nTPM: 39.1
2613 Female, age 94, left hemisphere 49.4
1938 Female, age 85, left hemisphere 40.9
1787 Male, age 76, left hemisphere 40.6
2764 Male, age 80, right hemisphere 39.3
2686 Male, age 75, right hemisphere 35.4
2117 Female, age 91, right hemisphere 29.1
Hippocampus, CA1
nTPM: 45.0
2749 Male, age 80, left hemisphere 65.7
1873 Female, age 85, both hemispheres 42.8
2527 Male, age 74, both hemispheres 41.7
2045 Male, age 76, both hemispheres 39.4
2082 Female, age 91, right hemisphere 35.3
Hippocampus, CA2
nTPM: 38.3
1963 Male, age 80, left hemisphere 48.0
1892 Male, age 76, both hemispheres 47.5
2437 Female, age 94, left hemisphere 41.2
2113 Female, age 91, right hemisphere 35.8
2249 Male, age 74, both hemispheres 29.2
1940 Female, age 85, left hemisphere 28.1
Hippocampus, CA3
nTPM: 43.1
2137 Male, age 80, left hemisphere 57.3
2861 Female, age 67, both hemispheres 50.1
2620 Female, age 94, left hemisphere 44.1
2436 Male, age 74, both hemispheres 39.9
1867 Male, age 76, both hemispheres 36.2
1891 Female, age 85, both hemispheres 30.9
Parahippocampal cortex
nTPM: 37.7
2245 Female, age 91, both hemispheres 44.9
2622 Female, age 67, right hemisphere 41.5
2692 Male, age 74, both hemispheres 40.5
1850 Male, age 80, both hemispheres 40.1
1933 Female, age 85, both hemispheres 38.0
2250 Female, age 67, right hemisphere 35.8
2532 Female, age 72, left hemisphere 35.8
2693 Female, age 94, both hemispheres 34.1
1990 Female, age 91, right hemisphere 33.9
2018 Male, age 76, both hemispheres 32.9
Perirhinal gyrus
nTPM: 42.4
1847 Female, age 91, left hemisphere 47.4
1794 Male, age 80, right hemisphere 45.3
2521 Female, age 94, right hemisphere 42.0
1841 Female, age 85, right hemisphere 39.3
2848 Male, age 76, right hemisphere 37.9
Subiculum
nTPM: 34.7
2438 Female, age 94, left hemisphere 39.6
1901 Male, age 80, both hemispheres 38.1
2619 Male, age 74, both hemispheres 36.5
1977 Female, age 85, both hemispheres 33.4
2042 Male, age 76, both hemispheres 32.0
2729 Female, age 91, right hemisphere 28.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.5
Samples: 197

Max nTPM: 67.3
Min nTPM: 7.5
Std nTPM: 9.0
Median nTPM: 27.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 67.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 57.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 51.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 45.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 45.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 44.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 43.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.2
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 94.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 38.8
Min nTPM: 24.3
Sample A Female 38.8
Sample B Female 35.6
Sample C Male 28.0
Sample D Male 24.3
Entorhinal cortex
nTPM: 33.0
Samples: 4

Max nTPM: 37.6
Min nTPM: 29.2
Sample A Female 37.6
Sample B Female 31.6
Sample C Male 33.5
Sample D Male 29.2
Subiculum
nTPM: 33.9
Samples: 4

Max nTPM: 42.5
Min nTPM: 29.0
Sample A Female 42.5
Sample B Female 30.9
Sample C Male 33.2
Sample D Male 29.0
Ventral hippocampus
nTPM: 33.3
Samples: 4

Max nTPM: 41.9
Min nTPM: 24.4
Sample A Female 33.4
Sample B Female 24.4
Sample C Male 41.9
Sample D Male 33.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.1
Samples: 4

Max nTPM: 80.0
Min nTPM: 56.1
Sample A Male 56.7
Sample B Male 56.1
Sample C Female 59.5
Sample D Female 80.0
Hippocampal formation
nTPM: 61.1
Samples: 4

Max nTPM: 67.4
Min nTPM: 53.5
Sample A Male 53.5
Sample B Male 63.5
Sample C Female 67.4
Sample D Female 59.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
68924799 Antisense, RP_050309_01_A07, Mouse strain C57BL/6J (56 days, male) 9.1

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