COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.2 nTPM
HPA:10.9 nTPM
GTEx:21.2 nTPM
FANTOM5:16.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA030090Antibody HPA030091
Endothelial cells MediumNot detected
Glandular cells MediumMedium
Peripheral nerve/ganglion MediumNot detected




COLON - HPA RNA-seqi
Average nTPM 10.9
overview
Male, age 54 		Colon sample 67
nTPM: 10.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 11.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 7.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 9.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 13.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 14.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 12.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 14.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 21.2
Samples: 373

Max nTPM: 37.0
Min nTPM: 4.4
Std nTPM: 5.2
Median nTPM: 20.4
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 37.0
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 36.9
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 35.6
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 35.6
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 35.5
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 34.6
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 33.9
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 33.8
GTEX-1GMR3-2526-SM-7P8QS 40-49 years, male 33.4
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 32.8
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 32.5
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Colon - Transverse
Average nTPM: 18.5
Samples: 406

Max nTPM: 43.5
Min nTPM: 7.0
Std nTPM: 4.1
Median nTPM: 18.1
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 43.5
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 32.5
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 32.4
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 32.3
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 32.0
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 29.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 29.5
GTEX-1AYD5-1726-SM-7RHFW 50-59 years, male 29.3
GTEX-1N5O9-2726-SM-E76QH 60-69 years, male 29.1
GTEX-X4EO-2526-SM-EWRM8 60-69 years, female 28.7
GTEX-1HCU6-2726-SM-A9SKV 60-69 years, female 28.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 16.2
FF:10014-101C5 62,83,84 years, mixed 16.2

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.