HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:15.5 nTPM
HPA:15.5 nTPM
GTEx:20.6 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:7.9 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008540
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
1898 Male, age 80, left hemisphere 15.1
1911 Female, age 85, right hemisphere 14.8
1855 Male, age 76, left hemisphere 14.4
2529 Female, age 94, left hemisphere 13.9
2621 Female, age 67, right hemisphere 13.1
2148 Female, age 91, left hemisphere 12.3
Dentate gyrus
nTPM: 13.6
2530 Female, age 94, left hemisphere 15.7
2010 Male, age 76, both hemispheres 14.6
2528 Male, age 74, both hemispheres 14.2
2246 Female, age 85, both hemispheres 12.9
1927 Female, age 91, both hemispheres 12.5
2531 Female, age 67, both hemispheres 11.5
Entorhinal gyrus
nTPM: 14.4
2117 Female, age 91, right hemisphere 17.0
2764 Male, age 80, right hemisphere 15.2
1938 Female, age 85, left hemisphere 14.6
1787 Male, age 76, left hemisphere 13.7
2613 Female, age 94, left hemisphere 13.7
2686 Male, age 75, right hemisphere 12.3
Hippocampus, CA1
nTPM: 13.5
2749 Male, age 80, left hemisphere 13.8
2527 Male, age 74, both hemispheres 13.6
1873 Female, age 85, both hemispheres 13.5
2082 Female, age 91, right hemisphere 13.4
2045 Male, age 76, both hemispheres 12.9
Hippocampus, CA2
nTPM: 14.2
1963 Male, age 80, left hemisphere 15.8
2249 Male, age 74, both hemispheres 15.2
2437 Female, age 94, left hemisphere 14.1
2113 Female, age 91, right hemisphere 13.7
1892 Male, age 76, both hemispheres 13.6
1940 Female, age 85, left hemisphere 13.0
Hippocampus, CA3
nTPM: 12.6
1891 Female, age 85, both hemispheres 15.8
1867 Male, age 76, both hemispheres 14.0
2436 Male, age 74, both hemispheres 12.5
2620 Female, age 94, left hemisphere 12.1
2137 Male, age 80, left hemisphere 11.9
2861 Female, age 67, both hemispheres 9.4
Parahippocampal cortex
nTPM: 13.1
2532 Female, age 72, left hemisphere 14.6
2692 Male, age 74, both hemispheres 14.2
1990 Female, age 91, right hemisphere 14.1
2018 Male, age 76, both hemispheres 13.9
1933 Female, age 85, both hemispheres 13.6
2693 Female, age 94, both hemispheres 13.5
1850 Male, age 80, both hemispheres 13.4
2245 Female, age 91, both hemispheres 12.1
2250 Female, age 67, right hemisphere 11.7
2622 Female, age 67, right hemisphere 9.5
Perirhinal gyrus
nTPM: 12.4
2848 Male, age 76, right hemisphere 13.6
2521 Female, age 94, right hemisphere 12.7
1847 Female, age 91, left hemisphere 12.5
1794 Male, age 80, right hemisphere 11.7
1841 Female, age 85, right hemisphere 11.5
Subiculum
nTPM: 15.5
2042 Male, age 76, both hemispheres 17.6
1977 Female, age 85, both hemispheres 16.6
1901 Male, age 80, both hemispheres 16.5
2438 Female, age 94, left hemisphere 14.7
2619 Male, age 74, both hemispheres 14.1
2729 Female, age 91, right hemisphere 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 66.0
Min nTPM: 4.5
Std nTPM: 10.8
Median nTPM: 17.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 66.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 60.7
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 56.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 50.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 50.0
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 48.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 46.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 44.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 42.5
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 41.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10153-102I9 76 years, female 25.3
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 5.1
Sample A Female 5.3
Sample B Female 5.1
Sample C Male 6.1
Sample D Male 5.3
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.2
Sample A Female 7.2
Sample B Female 7.3
Sample C Male 8.1
Sample D Male 7.4
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 6.8
Min nTPM: 6.1
Sample A Female 6.1
Sample B Female 6.4
Sample C Male 6.8
Sample D Male 6.3
Ventral hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.3
Sample A Female 5.3
Sample B Female 5.4
Sample C Male 6.7
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.4
Sample A Male 7.5
Sample B Male 7.6
Sample C Female 9.0
Sample D Female 7.4
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.0
Sample A Male 8.0
Sample B Male 7.2
Sample C Female 8.1
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
75774106 Antisense, RP_060530_01_B02, Mouse strain C57BL/6J (56 days, male) 1.9
75774637 Antisense, RP_060530_01_B02, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

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